RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.03
TRAF3-207ENST00000559734 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
TRAF3-207ENST00000559734 TTLL6Q8N841 843 aa14.83□□□□□ -0.04
TRAF3-207ENST00000559734 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
TRAF3-207ENST00000559734 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
TRAF3-207ENST00000559734 SOS1Q07889 1333 aaPredicted RBP14.82□□□□□ -0.04
TRAF3-207ENST00000559734 SERPINB2P05120 415 aa14.81□□□□□ -0.04
TRAF3-207ENST00000559734 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
TRAF3-207ENST00000559734 COL15A1P39059 1388 aa14.81□□□□□ -0.04
TRAF3-207ENST00000559734 H0YIN7 160 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 NFKBIEO00221 500 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 BICDL1Q6ZP65 573 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 CARMIL3Q8ND23 1372 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 ADAMTS7Q9UKP4 1686 aa14.8□□□□□ -0.04
TRAF3-207ENST00000559734 ZNF622Q969S3 477 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAF3-207ENST00000559734 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
TRAF3-207ENST00000559734 AFDNP55196 1824 aaKnown RBP14.78□□□□□ -0.04
TRAF3-207ENST00000559734 POTECB2RU33 542 aa14.78□□□□□ -0.04
TRAF3-207ENST00000559734 SLC39A6Q13433 755 aa14.78□□□□□ -0.04
TRAF3-207ENST00000559734 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
TRAF3-207ENST00000559734 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
TRAF3-207ENST00000559734 CANXP27824 592 aaKnown RBP14.77□□□□□ -0.05
TRAF3-207ENST00000559734 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
TRAF3-207ENST00000559734 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
TRAF3-207ENST00000559734 CREBZFQ9NS37 354 aa14.77□□□□□ -0.05
TRAF3-207ENST00000559734 DLEC1Q9Y238 1755 aa14.77□□□□□ -0.05
TRAF3-207ENST00000559734 NRXN2Q9P2S2 1712 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 FOXN1O15353 648 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 C21orf2O43822 256 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 CCDC24Q8N4L8 307 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 SLC52A2Q9HAB3 445 aa14.76□□□□□ -0.05
TRAF3-207ENST00000559734 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
TRAF3-207ENST00000559734 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
TRAF3-207ENST00000559734 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
TRAF3-207ENST00000559734 CCDC88AQ3V6T2 1871 aa14.75□□□□□ -0.05
TRAF3-207ENST00000559734 MORC1Q86VD1 984 aa14.74□□□□□ -0.05
TRAF3-207ENST00000559734 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
TRAF3-207ENST00000559734 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
TRAF3-207ENST00000559734 PCNTO95613 3336 aa14.74□□□□□ -0.05
TRAF3-207ENST00000559734 NPHP1O15259 732 aa14.73□□□□□ -0.05
TRAF3-207ENST00000559734 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
TRAF3-207ENST00000559734 TAOK3Q9H2K8 898 aa14.73□□□□□ -0.05
TRAF3-207ENST00000559734 PANK3Q9H999 370 aa14.73□□□□□ -0.05
TRAF3-207ENST00000559734 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
TRAF3-207ENST00000559734 RNMTO43148 476 aaKnown RBP14.72□□□□□ -0.05
TRAF3-207ENST00000559734 PDE6BP35913 854 aa14.72□□□□□ -0.05
TRAF3-207ENST00000559734 TBC1D9BQ66K14 1250 aa14.72□□□□□ -0.05
TRAF3-207ENST00000559734 KCNA4P22459 653 aa14.71□□□□□ -0.05
TRAF3-207ENST00000559734 CTCFP49711 727 aaPredicted RBP14.71□□□□□ -0.05
TRAF3-207ENST00000559734 PRDM10Q9NQV6 1147 aa14.71□□□□□ -0.05
TRAF3-207ENST00000559734 MRC1P22897 1456 aa14.7□□□□□ -0.06
TRAF3-207ENST00000559734 HMOX1P09601 288 aa14.7□□□□□ -0.06
TRAF3-207ENST00000559734 IL13P35225 146 aa14.7□□□□□ -0.06
TRAF3-207ENST00000559734 COL11A2P13942 1736 aaPredicted RBP14.69□□□□□ -0.06
TRAF3-207ENST00000559734 A0A087WZG4 1122 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 IQCA1LA6NCM1 817 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 STARD3NLO95772 234 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 VEGFBP49765 207 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 EAPPQ56P03 285 aaPredicted RBP14.69□□□□□ -0.06
TRAF3-207ENST00000559734 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 LDHDQ86WU2 507 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 BRIP1Q9BX63 1249 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 PDZRN3Q9UPQ7 1066 aa14.69□□□□□ -0.06
TRAF3-207ENST00000559734 ANKRD31Q8N7Z5 1873 aa14.68□□□□□ -0.06
TRAF3-207ENST00000559734 LBX1P52954 281 aa14.68□□□□□ -0.06
TRAF3-207ENST00000559734 PRPF40BQ6NWY9 871 aaKnown RBP14.68□□□□□ -0.06
TRAF3-207ENST00000559734 VSIG10Q8N0Z9 540 aa14.68□□□□□ -0.06
TRAF3-207ENST00000559734 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
TRAF3-207ENST00000559734 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
TRAF3-207ENST00000559734 PASKQ96RG2 1323 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 LTBP3Q9NS15 1303 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 TMEM88BA6NKF7 163 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
TRAF3-207ENST00000559734 CNBD1Q8NA66 436 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 FER1L6Q2WGJ9 1857 aa14.67□□□□□ -0.06
TRAF3-207ENST00000559734 ST5P78524 1137 aa14.66□□□□□ -0.06
TRAF3-207ENST00000559734 MTHFSDQ2M296 383 aaKnown RBP14.66□□□□□ -0.06
TRAF3-207ENST00000559734 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
TRAF3-207ENST00000559734 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
TRAF3-207ENST00000559734 TAF1DQ9H5J8 278 aaPredicted RBP14.66□□□□□ -0.06
TRAF3-207ENST00000559734 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
TRAF3-207ENST00000559734 SCN7AQ01118 1682 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 SLC34A2O95436 690 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 SOGA3Q5TF21 947 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 STYK1Q6J9G0 422 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 CACNA1SQ13698 1873 aa14.65□□□□□ -0.06
TRAF3-207ENST00000559734 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
TRAF3-207ENST00000559734 ABHD8Q96I13 439 aa14.64□□□□□ -0.07
TRAF3-207ENST00000559734 ZNF541Q9H0D2 1346 aa14.64□□□□□ -0.07
TRAF3-207ENST00000559734 SRGNP10124 158 aa14.63□□□□□ -0.07
TRAF3-207ENST00000559734 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
TRAF3-207ENST00000559734 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
TRAF3-207ENST00000559734 WBP1LQ9NX94 342 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms