RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.52
CLPX-205ENST00000559218 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.52
CLPX-205ENST00000559218 PCNTO95613 3336 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 CHRNA5P30532 468 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 APLP1P51693 650 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 DALRD3Q5D0E6 543 aaKnown RBP11.82□□□□□ -0.52
CLPX-205ENST00000559218 DNAJC5GQ8N7S2 189 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 CLSPNQ9HAW4 1339 aa11.82□□□□□ -0.52
CLPX-205ENST00000559218 DNAJC10Q8IXB1 793 aa11.81□□□□□ -0.52
CLPX-205ENST00000559218 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
CLPX-205ENST00000559218 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
CLPX-205ENST00000559218 TM4SF1P30408 202 aa11.8□□□□□ -0.52
CLPX-205ENST00000559218 TJP1Q07157 1748 aa11.8□□□□□ -0.52
CLPX-205ENST00000559218 HTRA3P83110 453 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 SLC39A6Q13433 755 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CLPX-205ENST00000559218 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 SLC52A2Q9HAB3 445 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 RNF181Q9P0P0 153 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
CLPX-205ENST00000559218 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
CLPX-205ENST00000559218 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
CLPX-205ENST00000559218 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
CLPX-205ENST00000559218 ZPR1O75312 459 aa11.78□□□□□ -0.52
CLPX-205ENST00000559218 HMOX1P09601 288 aa11.78□□□□□ -0.52
CLPX-205ENST00000559218 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
CLPX-205ENST00000559218 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
CLPX-205ENST00000559218 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
CLPX-205ENST00000559218 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
CLPX-205ENST00000559218 NFIXQ14938 502 aa11.77□□□□□ -0.53
CLPX-205ENST00000559218 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
CLPX-205ENST00000559218 RASSF7Q02833 373 aa11.76□□□□□ -0.53
CLPX-205ENST00000559218 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
CLPX-205ENST00000559218 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
CLPX-205ENST00000559218 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
CLPX-205ENST00000559218 RRAGCQ9HB90 399 aa11.76□□□□□ -0.53
CLPX-205ENST00000559218 NARFQ9UHQ1 456 aa11.76□□□□□ -0.53
CLPX-205ENST00000559218 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 ARFGEF1Q9Y6D6 1849 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 PRELPP51888 382 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 KDM2BQ8NHM5 1336 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 COL15A1P39059 1388 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 MRC1P22897 1456 aa11.75□□□□□ -0.53
CLPX-205ENST00000559218 KIF7Q2M1P5 1343 aa11.74□□□□□ -0.53
CLPX-205ENST00000559218 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
CLPX-205ENST00000559218 SERPINB2P05120 415 aa11.73□□□□□ -0.53
CLPX-205ENST00000559218 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
CLPX-205ENST00000559218 FSTL1Q12841 308 aa11.73□□□□□ -0.53
CLPX-205ENST00000559218 CARMIL3Q8ND23 1372 aa11.73□□□□□ -0.53
CLPX-205ENST00000559218 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
CLPX-205ENST00000559218 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
CLPX-205ENST00000559218 BICDL1Q6ZP65 573 aa11.72□□□□□ -0.53
CLPX-205ENST00000559218 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
CLPX-205ENST00000559218 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
CLPX-205ENST00000559218 KLRG1Q96E93 195 aa11.72□□□□□ -0.53
CLPX-205ENST00000559218 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
CLPX-205ENST00000559218 LMNB1P20700 586 aa11.71□□□□□ -0.53
CLPX-205ENST00000559218 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.53
CLPX-205ENST00000559218 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
CLPX-205ENST00000559218 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
CLPX-205ENST00000559218 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
CLPX-205ENST00000559218 NFKBIEO00221 500 aa11.7□□□□□ -0.54
CLPX-205ENST00000559218 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
CLPX-205ENST00000559218 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
CLPX-205ENST00000559218 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
CLPX-205ENST00000559218 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
CLPX-205ENST00000559218 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
CLPX-205ENST00000559218 H0YIN7 160 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 STARD3NLO95772 234 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 CNGB1Q14028 1251 aaPredicted RBP11.69□□□□□ -0.54
CLPX-205ENST00000559218 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
CLPX-205ENST00000559218 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 SBF1O95248 1867 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
CLPX-205ENST00000559218 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
CLPX-205ENST00000559218 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
CLPX-205ENST00000559218 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
CLPX-205ENST00000559218 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
CLPX-205ENST00000559218 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
CLPX-205ENST00000559218 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
CLPX-205ENST00000559218 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
CLPX-205ENST00000559218 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
CLPX-205ENST00000559218 A0A087WZG4 1122 aa11.67□□□□□ -0.54
CLPX-205ENST00000559218 POTECB2RU33 542 aa11.67□□□□□ -0.54
CLPX-205ENST00000559218 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
CLPX-205ENST00000559218 ZNF790Q6PG37 636 aa11.67□□□□□ -0.54
CLPX-205ENST00000559218 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLPX-205ENST00000559218 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
CLPX-205ENST00000559218 UBR2Q8IWV8 1755 aa11.67□□□□□ -0.54
CLPX-205ENST00000559218 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
CLPX-205ENST00000559218 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 KCNQ3O43525 872 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 C21orf2O43822 256 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 A1BGP04217 495 aa11.66□□□□□ -0.54
CLPX-205ENST00000559218 TEFQ10587 303 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms