RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 C7P10643 843 aa8.23□□□□□ -1.09
CTDSPL2-204ENST00000558966 MORC1Q86VD1 984 aa8.23□□□□□ -1.09
CTDSPL2-204ENST00000558966 BTAF1O14981 1849 aa8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 PKD1L3Q7Z443 1732 aa8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 DOT1LQ8TEK3 1739 aa8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 POTEIP0CG38 1075 aa8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 EIF4A2Q14240 407 aaKnown RBP8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 ACSBG1Q96GR2 724 aa8.22□□□□□ -1.09
CTDSPL2-204ENST00000558966 PLSCR1O15162 318 aa8.21□□□□□ -1.09
CTDSPL2-204ENST00000558966 OSBPP22059 807 aa8.21□□□□□ -1.09
CTDSPL2-204ENST00000558966 ZCRB1Q8TBF4 217 aaKnown RBP8.21□□□□□ -1.09
CTDSPL2-204ENST00000558966 RAPGEF4Q8WZA2 1011 aa8.21□□□□□ -1.09
CTDSPL2-204ENST00000558966 EYA1Q99502 592 aa8.21□□□□□ -1.09
CTDSPL2-204ENST00000558966 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL2-204ENST00000558966 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL2-204ENST00000558966 C3orf67Q6ZVT6 689 aa8.21□□□□□ -1.1
CTDSPL2-204ENST00000558966 DDX54Q8TDD1 881 aaKnown RBP8.21□□□□□ -1.1
CTDSPL2-204ENST00000558966 NPC1L1Q9UHC9 1359 aa8.2□□□□□ -1.1
CTDSPL2-204ENST00000558966 TRIM66O15016 1216 aa8.2□□□□□ -1.1
CTDSPL2-204ENST00000558966 TBC1D12O60347 775 aa8.2□□□□□ -1.1
CTDSPL2-204ENST00000558966 EVI5O60447 810 aa8.2□□□□□ -1.1
CTDSPL2-204ENST00000558966 IGSF1Q8N6C5 1336 aa8.2□□□□□ -1.1
CTDSPL2-204ENST00000558966 R3HDM1Q15032 1099 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 CC2D1BQ5T0F9 858 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 TOGARAM1Q9Y4F4 1720 aa8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 CYP27B1O15528 508 aa8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 PRIM1P49642 420 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 PCDH11XQ9BZA7 1347 aa8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 PCDH11YQ9BZA8 1340 aa8.19□□□□□ -1.1
CTDSPL2-204ENST00000558966 PTGER2P43116 358 aa8.18□□□□□ -1.1
CTDSPL2-204ENST00000558966 TXNRD1Q16881 649 aa8.18□□□□□ -1.1
CTDSPL2-204ENST00000558966 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-204ENST00000558966 LRP5O75197 1615 aa8.18□□□□□ -1.1
CTDSPL2-204ENST00000558966 PAPPAQ13219 1627 aa8.18□□□□□ -1.1
CTDSPL2-204ENST00000558966 PDE4DQ08499 809 aa8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 IL13P35225 146 aa8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 MTHFSP49914 203 aa8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 CNGB1Q14028 1251 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 ITGB4P16144 1822 aa8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 PLEKHG2Q9H7P9 1386 aa8.17□□□□□ -1.1
CTDSPL2-204ENST00000558966 COL3A1P02461 1466 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 LY75O60449 1722 aa8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 PTCD2Q8WV60 388 aaKnown RBP8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 KDM4CQ9H3R0 1056 aa8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 KDRP35968 1356 aa8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 CASZ1Q86V15 1759 aa8.16□□□□□ -1.1
CTDSPL2-204ENST00000558966 FECHP22830 423 aa8.15□□□□□ -1.1
CTDSPL2-204ENST00000558966 NBPF14Q5TI25 921 aa8.15□□□□□ -1.1
CTDSPL2-204ENST00000558966 IL27Q8NEV9 243 aa8.15□□□□□ -1.1
CTDSPL2-204ENST00000558966 SPG7Q9UQ90 795 aa8.15□□□□□ -1.1
CTDSPL2-204ENST00000558966 LRRC4BQ9NT99 713 aa8.15□□□□□ -1.11
CTDSPL2-204ENST00000558966 GNPATO15228 680 aa8.14□□□□□ -1.11
CTDSPL2-204ENST00000558966 PHKG2P15735 406 aa8.14□□□□□ -1.11
CTDSPL2-204ENST00000558966 MAP2K5Q13163 448 aa8.14□□□□□ -1.11
CTDSPL2-204ENST00000558966 SULT6B1Q6IMI4 303 aa8.14□□□□□ -1.11
CTDSPL2-204ENST00000558966 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
CTDSPL2-204ENST00000558966 TUBGCP6Q96RT7 1819 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 FCHSD2O94868 740 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 IRF6O14896 467 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 KCNQ4P56696 695 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 SLC15A2Q16348 729 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 ZNF827Q17R98 1081 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 PDGFDQ9GZP0 370 aaPredicted RBP8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 STK32BQ9NY57 414 aa8.13□□□□□ -1.11
CTDSPL2-204ENST00000558966 KDM6AO15550 1401 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 SLC34A2O95436 690 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 HIC1Q14526 733 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 PLEKHO1Q53GL0 409 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 SLC27A3Q5K4L6 730 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 ZNF530Q6P9A1 599 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 PIGBQ92521 554 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 TAF1LQ8IZX4 1826 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 QSER1Q2KHR3 1735 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 PALLDQ8WX93 1383 aa8.12□□□□□ -1.11
CTDSPL2-204ENST00000558966 HMOX1P09601 288 aa8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 PPP2R1AP30153 589 aa8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 AMOTQ4VCS5 1084 aa8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 C5P01031 1676 aa8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 SP7Q8TDD2 431 aaPredicted RBP8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
CTDSPL2-204ENST00000558966 VIRMAQ69YN4 1812 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 PTGDRQ13258 359 aa8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
CTDSPL2-204ENST00000558966 HSP90AB1P08238 724 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-204ENST00000558966 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
CTDSPL2-204ENST00000558966 ASAP1Q9ULH1 1129 aa8.09□□□□□ -1.11
CTDSPL2-204ENST00000558966 ADAMTS7Q9UKP4 1686 aa8.09□□□□□ -1.11
CTDSPL2-204ENST00000558966 C4BP0C0L5 1744 aa8.09□□□□□ -1.11
CTDSPL2-204ENST00000558966 ERVV-2B6SEH9 535 aa8.09□□□□□ -1.12
CTDSPL2-204ENST00000558966 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms