RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
RPL28-206ENST00000558752 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
RPL28-206ENST00000558752 DIAPH1O60610 1272 aaKnown RBP20.52■□□□□ 0.88
RPL28-206ENST00000558752 CAPN15O75808 1086 aa20.52■□□□□ 0.88
RPL28-206ENST00000558752 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
RPL28-206ENST00000558752 HMOX1P09601 288 aa20.51■□□□□ 0.87
RPL28-206ENST00000558752 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
RPL28-206ENST00000558752 CHRNA5P30532 468 aa20.51■□□□□ 0.87
RPL28-206ENST00000558752 FSTL1Q12841 308 aa20.51■□□□□ 0.87
RPL28-206ENST00000558752 TTC5Q8N0Z6 440 aa20.51■□□□□ 0.87
RPL28-206ENST00000558752 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
RPL28-206ENST00000558752 A0A087WZG4 1122 aa20.5■□□□□ 0.87
RPL28-206ENST00000558752 COL15A1P39059 1388 aa20.49■□□□□ 0.87
RPL28-206ENST00000558752 STARD3NLO95772 234 aa20.49■□□□□ 0.87
RPL28-206ENST00000558752 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
RPL28-206ENST00000558752 KLRG1Q96E93 195 aa20.49■□□□□ 0.87
RPL28-206ENST00000558752 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
RPL28-206ENST00000558752 MRC1P22897 1456 aa20.48■□□□□ 0.87
RPL28-206ENST00000558752 SERPINB2P05120 415 aa20.47■□□□□ 0.87
RPL28-206ENST00000558752 NFIXQ14938 502 aa20.47■□□□□ 0.87
RPL28-206ENST00000558752 MTHFSDQ2M296 383 aaKnown RBP20.47■□□□□ 0.87
RPL28-206ENST00000558752 NPM2Q86SE8 214 aaKnown RBP20.47■□□□□ 0.87
RPL28-206ENST00000558752 PDZRN3Q9UPQ7 1066 aa20.47■□□□□ 0.87
RPL28-206ENST00000558752 H0YIN7 160 aa20.46■□□□□ 0.87
RPL28-206ENST00000558752 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
RPL28-206ENST00000558752 JMYQ8N9B5 988 aa20.46■□□□□ 0.87
RPL28-206ENST00000558752 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
RPL28-206ENST00000558752 LMNB1P20700 586 aa20.45■□□□□ 0.86
RPL28-206ENST00000558752 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
RPL28-206ENST00000558752 TEFQ10587 303 aa20.45■□□□□ 0.86
RPL28-206ENST00000558752 RRAGCQ9HB90 399 aa20.45■□□□□ 0.86
RPL28-206ENST00000558752 KCPQ6ZWJ8 1503 aa20.44■□□□□ 0.86
RPL28-206ENST00000558752 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
RPL28-206ENST00000558752 SMC1BQ8NDV3 1235 aa20.44■□□□□ 0.86
RPL28-206ENST00000558752 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
RPL28-206ENST00000558752 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
RPL28-206ENST00000558752 C2CD5Q86YS7 1000 aa20.43■□□□□ 0.86
RPL28-206ENST00000558752 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
RPL28-206ENST00000558752 WDR90Q96KV7 1748 aa20.42■□□□□ 0.86
RPL28-206ENST00000558752 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
RPL28-206ENST00000558752 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
RPL28-206ENST00000558752 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
RPL28-206ENST00000558752 SBF1O95248 1867 aa20.41■□□□□ 0.86
RPL28-206ENST00000558752 U2SURPO15042 1029 aaKnown RBP20.4■□□□□ 0.86
RPL28-206ENST00000558752 VEGFAP15692 232 aaPredicted RBP20.4■□□□□ 0.86
RPL28-206ENST00000558752 PDE6BP35913 854 aa20.4■□□□□ 0.86
RPL28-206ENST00000558752 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
RPL28-206ENST00000558752 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
RPL28-206ENST00000558752 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
RPL28-206ENST00000558752 GLTPD2A6NH11 291 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 ZNF790Q6PG37 636 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 BICDL1Q6ZP65 573 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.85
RPL28-206ENST00000558752 IL6STP40189 918 aaPredicted RBP20.38■□□□□ 0.85
RPL28-206ENST00000558752 RASSF7Q02833 373 aa20.38■□□□□ 0.85
RPL28-206ENST00000558752 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
RPL28-206ENST00000558752 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
RPL28-206ENST00000558752 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
RPL28-206ENST00000558752 PCNTO95613 3336 aa20.38■□□□□ 0.85
RPL28-206ENST00000558752 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
RPL28-206ENST00000558752 NPHP1O15259 732 aa20.37■□□□□ 0.85
RPL28-206ENST00000558752 PRELPP51888 382 aa20.37■□□□□ 0.85
RPL28-206ENST00000558752 BRIP1Q9BX63 1249 aa20.37■□□□□ 0.85
RPL28-206ENST00000558752 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
RPL28-206ENST00000558752 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
RPL28-206ENST00000558752 ZNF622Q969S3 477 aaKnown RBP eCLIP20.36■□□□□ 0.85
RPL28-206ENST00000558752 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
RPL28-206ENST00000558752 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
RPL28-206ENST00000558752 DLEC1Q9Y238 1755 aa20.35■□□□□ 0.85
RPL28-206ENST00000558752 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
RPL28-206ENST00000558752 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
RPL28-206ENST00000558752 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
RPL28-206ENST00000558752 ST5P78524 1137 aa20.33■□□□□ 0.85
RPL28-206ENST00000558752 SOGA3Q5TF21 947 aa20.33■□□□□ 0.85
RPL28-206ENST00000558752 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.85
RPL28-206ENST00000558752 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
RPL28-206ENST00000558752 TBC1D2BQ9UPU7 963 aa20.33■□□□□ 0.85
RPL28-206ENST00000558752 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
RPL28-206ENST00000558752 PRR5LQ6MZQ0 368 aa20.31■□□□□ 0.84
RPL28-206ENST00000558752 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
RPL28-206ENST00000558752 NFKBIEO00221 500 aa20.3■□□□□ 0.84
RPL28-206ENST00000558752 RALBP1Q15311 655 aa20.3■□□□□ 0.84
RPL28-206ENST00000558752 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
RPL28-206ENST00000558752 C21orf2O43822 256 aa20.29■□□□□ 0.84
RPL28-206ENST00000558752 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
RPL28-206ENST00000558752 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
RPL28-206ENST00000558752 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
RPL28-206ENST00000558752 ZNF652Q9Y2D9 606 aa20.29■□□□□ 0.84
RPL28-206ENST00000558752 COL3A1P02461 1466 aaPredicted RBP20.29■□□□□ 0.84
RPL28-206ENST00000558752 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
RPL28-206ENST00000558752 STYK1Q6J9G0 422 aa20.28■□□□□ 0.84
RPL28-206ENST00000558752 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
RPL28-206ENST00000558752 CEMIPQ8WUJ3 1361 aa20.28■□□□□ 0.84
RPL28-206ENST00000558752 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
RPL28-206ENST00000558752 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
RPL28-206ENST00000558752 SCN7AQ01118 1682 aa20.27■□□□□ 0.84
RPL28-206ENST00000558752 A1BGP04217 495 aa20.27■□□□□ 0.84
RPL28-206ENST00000558752 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms