RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 USP4Q13107 963 aa10□□□□□ -0.81
CLPX-202ENST00000558103 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
CLPX-202ENST00000558103 ZMYND15Q9H091 742 aa10□□□□□ -0.81
CLPX-202ENST00000558103 PLCH2O75038 1416 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 FMN1Q68DA7 1419 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 PLPP7Q8NBV4 271 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
CLPX-202ENST00000558103 KDM5CP41229 1560 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
CLPX-202ENST00000558103 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 ATP5J2-PTCD1G3V325 749 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 H3BM21 787 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 MYCP01106 439 aaPredicted RBP9.98□□□□□ -0.81
CLPX-202ENST00000558103 GSK3AP49840 483 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 NFATC2IPQ8NCF5 419 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 OSBPL3Q9H4L5 887 aa9.98□□□□□ -0.81
CLPX-202ENST00000558103 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
CLPX-202ENST00000558103 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
CLPX-202ENST00000558103 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
CLPX-202ENST00000558103 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
CLPX-202ENST00000558103 SKIP12755 728 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 KCNMA1Q12791 1236 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 CYP2U1Q7Z449 544 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 GLMNQ92990 594 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 INSM2Q96T92 566 aaPredicted RBP9.96□□□□□ -0.82
CLPX-202ENST00000558103 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.82
CLPX-202ENST00000558103 TTLL8A6PVC2 850 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 LZTS3O60299 673 aaPredicted RBP9.95□□□□□ -0.82
CLPX-202ENST00000558103 ZNF777Q9ULD5 760 aaPredicted RBP9.95□□□□□ -0.82
CLPX-202ENST00000558103 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 REREQ9P2R6 1566 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 DIP2CQ9Y2E4 1556 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 ABCA6Q8N139 1617 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 CDC42BPAQ5VT25 1732 aa9.95□□□□□ -0.82
CLPX-202ENST00000558103 ATP10AO60312 1499 aa9.94□□□□□ -0.82
CLPX-202ENST00000558103 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
CLPX-202ENST00000558103 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
CLPX-202ENST00000558103 A0A1W2PRU2 124 aa9.94□□□□□ -0.82
CLPX-202ENST00000558103 MAN1A2O60476 641 aa9.94□□□□□ -0.82
CLPX-202ENST00000558103 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
CLPX-202ENST00000558103 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
CLPX-202ENST00000558103 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
CLPX-202ENST00000558103 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 GNRH1P01148 92 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 UCN2Q96RP3 112 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
CLPX-202ENST00000558103 C3P01024 1663 aa9.93□□□□□ -0.82
CLPX-202ENST00000558103 ABCC1P33527 1531 aa9.92□□□□□ -0.82
CLPX-202ENST00000558103 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
CLPX-202ENST00000558103 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
CLPX-202ENST00000558103 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
CLPX-202ENST00000558103 KIDINS220Q9ULH0 1771 aa9.91□□□□□ -0.82
CLPX-202ENST00000558103 RNF144AP50876 292 aaPredicted RBP9.91□□□□□ -0.82
CLPX-202ENST00000558103 TMEM151AQ8N4L1 468 aa9.91□□□□□ -0.82
CLPX-202ENST00000558103 SETD1BQ9UPS6 1966 aaKnown RBP9.91□□□□□ -0.82
CLPX-202ENST00000558103 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
CLPX-202ENST00000558103 CLIP1P30622 1438 aa9.9□□□□□ -0.82
CLPX-202ENST00000558103 USP17L5A8MUK1 530 aa9.9□□□□□ -0.82
CLPX-202ENST00000558103 MEN1O00255 615 aa9.9□□□□□ -0.82
CLPX-202ENST00000558103 CLN3Q13286 438 aa9.9□□□□□ -0.82
CLPX-202ENST00000558103 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
CLPX-202ENST00000558103 EML3Q32P44 896 aa9.9□□□□□ -0.82
CLPX-202ENST00000558103 ATP9BO43861 1147 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 HSPA2P54652 639 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 NCOA4Q13772 614 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 ARHGEF10LQ9HCE6 1279 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 TFIP11Q9UBB9 837 aaKnown RBP9.89□□□□□ -0.83
CLPX-202ENST00000558103 MLH3Q9UHC1 1453 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 CASKIN1Q8WXD9 1431 aa9.89□□□□□ -0.83
CLPX-202ENST00000558103 AGLP35573 1532 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 GDF11O95390 407 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 GPC1P35052 558 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
CLPX-202ENST00000558103 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 RNF217Q8TC41 542 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 XAGE2Q96GT9 111 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 CDK11AQ9UQ88 783 aaPredicted RBP9.88□□□□□ -0.83
CLPX-202ENST00000558103 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 PCDHGA11Q9Y5H2 935 aa9.88□□□□□ -0.83
CLPX-202ENST00000558103 MLECQ14165 292 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 XP32Q5T750 250 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 CNKSR1Q969H4 720 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 ESYT1Q9BSJ8 1104 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 PPP1R12CQ9BZL4 782 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 RAB6BQ9NRW1 208 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 SAMD9LQ8IVG5 1584 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
CLPX-202ENST00000558103 FYCO1Q9BQS8 1478 aa9.86□□□□□ -0.83
CLPX-202ENST00000558103 IL2RAP01589 272 aa9.86□□□□□ -0.83
CLPX-202ENST00000558103 RASSF7Q02833 373 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms