RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 MCM10Q7L590 875 aa21.62■■□□□ 1.05
AC027088.1-201ENST00000557966 PARP3Q9Y6F1 533 aa21.62■■□□□ 1.05
AC027088.1-201ENST00000557966 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
AC027088.1-201ENST00000557966 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
AC027088.1-201ENST00000557966 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
AC027088.1-201ENST00000557966 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
AC027088.1-201ENST00000557966 RTF1Q92541 710 aaKnown RBP21.59■■□□□ 1.05
AC027088.1-201ENST00000557966 FMNL2Q96PY5 1086 aa21.59■■□□□ 1.05
AC027088.1-201ENST00000557966 BCL2L12Q9HB09 334 aa21.59■■□□□ 1.05
AC027088.1-201ENST00000557966 NARFQ9UHQ1 456 aa21.59■■□□□ 1.05
AC027088.1-201ENST00000557966 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 ZPR1O75312 459 aa21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 STARD3NLO95772 234 aa21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 TM4SF1P30408 202 aa21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 TGFB2P61812 414 aa21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 PLEKHF1Q96S99 279 aa21.58■■□□□ 1.05
AC027088.1-201ENST00000557966 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
AC027088.1-201ENST00000557966 EIF5P55010 431 aaKnown RBP21.57■■□□□ 1.04
AC027088.1-201ENST00000557966 SCN7AQ01118 1682 aa21.56■■□□□ 1.04
AC027088.1-201ENST00000557966 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
AC027088.1-201ENST00000557966 DPEP1P16444 411 aa21.56■■□□□ 1.04
AC027088.1-201ENST00000557966 RALBP1Q15311 655 aa21.56■■□□□ 1.04
AC027088.1-201ENST00000557966 BRCA1P38398 1863 aaKnown RBP21.56■■□□□ 1.04
AC027088.1-201ENST00000557966 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
AC027088.1-201ENST00000557966 NFIXQ14938 502 aa21.55■■□□□ 1.04
AC027088.1-201ENST00000557966 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
AC027088.1-201ENST00000557966 NRXN2Q9P2S2 1712 aa21.55■■□□□ 1.04
AC027088.1-201ENST00000557966 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
AC027088.1-201ENST00000557966 ADCY9O60503 1353 aa21.53■■□□□ 1.04
AC027088.1-201ENST00000557966 A1BGP04217 495 aa21.53■■□□□ 1.04
AC027088.1-201ENST00000557966 KCNA3P22001 575 aa21.53■■□□□ 1.04
AC027088.1-201ENST00000557966 AFDNP55196 1824 aaKnown RBP21.52■■□□□ 1.04
AC027088.1-201ENST00000557966 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
AC027088.1-201ENST00000557966 USP16Q9Y5T5 823 aa21.52■■□□□ 1.04
AC027088.1-201ENST00000557966 IL6STP40189 918 aaPredicted RBP21.51■■□□□ 1.03
AC027088.1-201ENST00000557966 NFE2L2Q16236 605 aa21.51■■□□□ 1.03
AC027088.1-201ENST00000557966 ZNF330Q9Y3S2 320 aaPredicted RBP21.51■■□□□ 1.03
AC027088.1-201ENST00000557966 ATP10DQ9P241 1426 aa21.51■■□□□ 1.03
AC027088.1-201ENST00000557966 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
AC027088.1-201ENST00000557966 A0A087WZG4 1122 aa21.5■■□□□ 1.03
AC027088.1-201ENST00000557966 NEFMP07197 916 aa21.5■■□□□ 1.03
AC027088.1-201ENST00000557966 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
AC027088.1-201ENST00000557966 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
AC027088.1-201ENST00000557966 BCORQ6W2J9 1755 aa21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 CHRNA5P30532 468 aa21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 TAF7Q15545 349 aaPredicted RBP21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 MIS18AQ9NYP9 233 aa21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 TBC1D2BQ9UPU7 963 aa21.49■■□□□ 1.03
AC027088.1-201ENST00000557966 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
AC027088.1-201ENST00000557966 SERPINB2P05120 415 aa21.48■■□□□ 1.03
AC027088.1-201ENST00000557966 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
AC027088.1-201ENST00000557966 LAMB4A4D0S4 1761 aa21.47■■□□□ 1.03
AC027088.1-201ENST00000557966 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
AC027088.1-201ENST00000557966 TBC1D9BQ66K14 1250 aa21.47■■□□□ 1.03
AC027088.1-201ENST00000557966 BICDL1Q6ZP65 573 aa21.47■■□□□ 1.03
AC027088.1-201ENST00000557966 CAMTA2O94983 1202 aa21.46■■□□□ 1.03
AC027088.1-201ENST00000557966 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.03
AC027088.1-201ENST00000557966 PIM2Q9P1W9 311 aa21.45■■□□□ 1.02
AC027088.1-201ENST00000557966 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
AC027088.1-201ENST00000557966 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
AC027088.1-201ENST00000557966 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
AC027088.1-201ENST00000557966 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
AC027088.1-201ENST00000557966 DLEC1Q9Y238 1755 aa21.43■■□□□ 1.02
AC027088.1-201ENST00000557966 DZIP3Q86Y13 1208 aaKnown RBP21.43■■□□□ 1.02
AC027088.1-201ENST00000557966 GIGYF1O75420 1035 aaPredicted RBP21.42■■□□□ 1.02
AC027088.1-201ENST00000557966 DALRD3Q5D0E6 543 aaKnown RBP21.42■■□□□ 1.02
AC027088.1-201ENST00000557966 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
AC027088.1-201ENST00000557966 ANKRD31Q8N7Z5 1873 aa21.41■■□□□ 1.02
AC027088.1-201ENST00000557966 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
AC027088.1-201ENST00000557966 C1QTNF8P60827 252 aa21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 PRR5LQ6MZQ0 368 aa21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 ZNF526Q8TF50 670 aaPredicted RBP21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 PRKRIP1Q9H875 184 aaPredicted RBP21.4■■□□□ 1.02
AC027088.1-201ENST00000557966 COL11A2P13942 1736 aaPredicted RBP21.39■■□□□ 1.01
AC027088.1-201ENST00000557966 TMPOP42166 694 aaKnown RBP21.39■■□□□ 1.01
AC027088.1-201ENST00000557966 RIPK4P57078 832 aa21.39■■□□□ 1.01
AC027088.1-201ENST00000557966 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
AC027088.1-201ENST00000557966 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
AC027088.1-201ENST00000557966 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
AC027088.1-201ENST00000557966 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
AC027088.1-201ENST00000557966 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
AC027088.1-201ENST00000557966 SETDB2Q96T68 719 aa21.36■■□□□ 1.01
AC027088.1-201ENST00000557966 TSPYL4Q9UJ04 414 aa21.35■■□□□ 1.01
AC027088.1-201ENST00000557966 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
AC027088.1-201ENST00000557966 CLEC4GQ6UXB4 293 aa21.34■■□□□ 1.01
AC027088.1-201ENST00000557966 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
AC027088.1-201ENST00000557966 H0YIN7 160 aa21.33■■□□□ 1.01
AC027088.1-201ENST00000557966 C9orf131Q5VYM1 1079 aa21.33■■□□□ 1.01
AC027088.1-201ENST00000557966 CNBD1Q8NA66 436 aa21.33■■□□□ 1.01
AC027088.1-201ENST00000557966 RUNDC1Q96C34 613 aa21.33■■□□□ 1.01
AC027088.1-201ENST00000557966 ADAMTS8Q9UP79 889 aa21.33■■□□□ 1.01
AC027088.1-201ENST00000557966 RASSF7Q02833 373 aa21.32■■□□□ 1
AC027088.1-201ENST00000557966 LMOD3Q0VAK6 560 aa21.32■■□□□ 1
AC027088.1-201ENST00000557966 HLFQ16534 295 aa21.32■■□□□ 1
AC027088.1-201ENST00000557966 TTLL6Q8N841 843 aa21.32■■□□□ 1
AC027088.1-201ENST00000557966 ZNF652Q9Y2D9 606 aa21.32■■□□□ 1
AC027088.1-201ENST00000557966 RGL2O15211 777 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms