RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 POTEJP0CG39 1038 aa8.43□□□□□ -1.06
TRPM1-204ENST00000557948 HABP4Q5JVS0 413 aaKnown RBP8.43□□□□□ -1.06
TRPM1-204ENST00000557948 IFNL1Q8IU54 200 aa8.43□□□□□ -1.06
TRPM1-204ENST00000557948 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
TRPM1-204ENST00000557948 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
TRPM1-204ENST00000557948 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
TRPM1-204ENST00000557948 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
TRPM1-204ENST00000557948 GNPATO15228 680 aa8.42□□□□□ -1.06
TRPM1-204ENST00000557948 MAP3K13O43283 966 aa8.42□□□□□ -1.06
TRPM1-204ENST00000557948 TMF1P82094 1093 aa8.42□□□□□ -1.06
TRPM1-204ENST00000557948 NBPF15Q8N660 670 aa8.42□□□□□ -1.06
TRPM1-204ENST00000557948 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
TRPM1-204ENST00000557948 ABT1Q9ULW3 272 aaKnown RBP8.42□□□□□ -1.06
TRPM1-204ENST00000557948 FAM208AQ9UK61 1670 aaKnown RBP8.41□□□□□ -1.06
TRPM1-204ENST00000557948 THSD7BQ9C0I4 1608 aa8.41□□□□□ -1.06
TRPM1-204ENST00000557948 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
TRPM1-204ENST00000557948 ZCRB1Q8TBF4 217 aaKnown RBP8.41□□□□□ -1.06
TRPM1-204ENST00000557948 SMARCC1Q92922 1105 aaPredicted RBP8.41□□□□□ -1.06
TRPM1-204ENST00000557948 MFRPQ9BY79 579 aa8.41□□□□□ -1.06
TRPM1-204ENST00000557948 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.06
TRPM1-204ENST00000557948 GRM1Q13255 1194 aa8.4□□□□□ -1.06
TRPM1-204ENST00000557948 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.06
TRPM1-204ENST00000557948 CABP2Q9NPB3 220 aa8.4□□□□□ -1.06
TRPM1-204ENST00000557948 DICER1Q9UPY3 1922 aaKnown RBP8.4□□□□□ -1.06
TRPM1-204ENST00000557948 LTBP1Q14766 1721 aa8.4□□□□□ -1.07
TRPM1-204ENST00000557948 CA12O43570 354 aa8.39□□□□□ -1.07
TRPM1-204ENST00000557948 ITGBL1O95965 494 aaPredicted RBP8.39□□□□□ -1.07
TRPM1-204ENST00000557948 CHRNA5P30532 468 aa8.39□□□□□ -1.07
TRPM1-204ENST00000557948 ECE1P42892 770 aa8.39□□□□□ -1.07
TRPM1-204ENST00000557948 LINC00116Q8NCU8 138 aa8.39□□□□□ -1.07
TRPM1-204ENST00000557948 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
TRPM1-204ENST00000557948 GPR101Q96P66 508 aaPredicted RBP8.39□□□□□ -1.07
TRPM1-204ENST00000557948 ITGB4P16144 1822 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 IQCA1LA6NCM1 817 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 TRAPPC3LQ5T215 181 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 CAPNS2Q96L46 248 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 SCN4AP35499 1836 aa8.38□□□□□ -1.07
TRPM1-204ENST00000557948 CUL9Q8IWT3 2517 aa8.37□□□□□ -1.07
TRPM1-204ENST00000557948 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
TRPM1-204ENST00000557948 LTV1Q96GA3 475 aaPredicted RBP8.37□□□□□ -1.07
TRPM1-204ENST00000557948 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
TRPM1-204ENST00000557948 LOC102724428A0A0B4J2F2 783 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 PPP1R37O75864 691 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 FXR1P51114 621 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRPM1-204ENST00000557948 SIK1P57059 783 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 EAPPQ56P03 285 aaPredicted RBP8.36□□□□□ -1.07
TRPM1-204ENST00000557948 EFCAB3Q8N7B9 438 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 MPHOSPH9Q99550 1183 aa8.36□□□□□ -1.07
TRPM1-204ENST00000557948 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
TRPM1-204ENST00000557948 RGPD2P0DJD1 1756 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 MEGF6O75095 1541 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
TRPM1-204ENST00000557948 GYS1P13807 737 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 RFC4P35249 363 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
TRPM1-204ENST00000557948 MAP2K2P36507 400 aa8.34□□□□□ -1.07
TRPM1-204ENST00000557948 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
TRPM1-204ENST00000557948 CNTROBQ8N137 903 aa8.34□□□□□ -1.07
TRPM1-204ENST00000557948 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
TRPM1-204ENST00000557948 TAF1DQ9H5J8 278 aaPredicted RBP8.34□□□□□ -1.07
TRPM1-204ENST00000557948 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 NFKBIEO00221 500 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 AOC2O75106 756 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
TRPM1-204ENST00000557948 ITPK1Q13572 414 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
TRPM1-204ENST00000557948 ADAMTS7Q9UKP4 1686 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 DLEC1Q9Y238 1755 aa8.33□□□□□ -1.08
TRPM1-204ENST00000557948 CGNL1Q0VF96 1302 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 PCDH11XQ9BZA7 1347 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 PCDH11YQ9BZA8 1340 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 CLSPNQ9HAW4 1339 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
TRPM1-204ENST00000557948 TTLL6Q8N841 843 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 TRPM7Q96QT4 1865 aa8.32□□□□□ -1.08
TRPM1-204ENST00000557948 PITPNM2Q9BZ72 1349 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 ADAMTSL1Q8N6G6 1762 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
TRPM1-204ENST00000557948 NEUROD1Q13562 356 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRPM1-204ENST00000557948 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 PIGBQ92521 554 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 IP6K1Q92551 441 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRPM1-204ENST00000557948 FER1L6Q2WGJ9 1857 aa8.31□□□□□ -1.08
TRPM1-204ENST00000557948 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
TRPM1-204ENST00000557948 CENPJQ9HC77 1338 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-204ENST00000557948 DDR1Q08345 913 aa8.3□□□□□ -1.08
TRPM1-204ENST00000557948 PNMA8AQ86V59 439 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-204ENST00000557948 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
TRPM1-204ENST00000557948 STAC3Q96MF2 364 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms