RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 ADAMTS7Q9UKP4 1686 aa12.33□□□□□ -0.44
NPC2-209ENST00000557510 TRAPPC3LQ5T215 181 aa12.33□□□□□ -0.44
NPC2-209ENST00000557510 RTCBQ9Y3I0 505 aaKnown RBP12.33□□□□□ -0.44
NPC2-209ENST00000557510 PER1O15534 1290 aaPredicted RBP12.32□□□□□ -0.44
NPC2-209ENST00000557510 GYS1P13807 737 aa12.32□□□□□ -0.44
NPC2-209ENST00000557510 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
NPC2-209ENST00000557510 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
NPC2-209ENST00000557510 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
NPC2-209ENST00000557510 RPS6KA4O75676 772 aa12.31□□□□□ -0.44
NPC2-209ENST00000557510 HMOX1P09601 288 aa12.31□□□□□ -0.44
NPC2-209ENST00000557510 GSE1Q14687 1217 aa12.31□□□□□ -0.44
NPC2-209ENST00000557510 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
NPC2-209ENST00000557510 SRP68Q9UHB9 627 aaKnown RBP12.31□□□□□ -0.44
NPC2-209ENST00000557510 MRC1P22897 1456 aa12.3□□□□□ -0.44
NPC2-209ENST00000557510 CRKLP46109 303 aaKnown RBP12.3□□□□□ -0.44
NPC2-209ENST00000557510 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
NPC2-209ENST00000557510 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
NPC2-209ENST00000557510 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
NPC2-209ENST00000557510 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
NPC2-209ENST00000557510 COL3A1P02461 1466 aaPredicted RBP12.29□□□□□ -0.44
NPC2-209ENST00000557510 KCPQ6ZWJ8 1503 aa12.29□□□□□ -0.44
NPC2-209ENST00000557510 A0A0G2JLW4 131 aa12.29□□□□□ -0.44
NPC2-209ENST00000557510 RFC4P35249 363 aa12.29□□□□□ -0.44
NPC2-209ENST00000557510 INTS5Q6P9B9 1019 aaKnown RBP12.29□□□□□ -0.44
NPC2-209ENST00000557510 NLGN1Q8N2Q7 840 aa12.29□□□□□ -0.44
NPC2-209ENST00000557510 DPEP1P16444 411 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 DDR1Q08345 913 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
NPC2-209ENST00000557510 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
NPC2-209ENST00000557510 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
NPC2-209ENST00000557510 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.44
NPC2-209ENST00000557510 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
NPC2-209ENST00000557510 MTHFSDQ2M296 383 aaKnown RBP12.27□□□□□ -0.45
NPC2-209ENST00000557510 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
NPC2-209ENST00000557510 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
NPC2-209ENST00000557510 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
NPC2-209ENST00000557510 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
NPC2-209ENST00000557510 BBXQ8WY36 941 aaPredicted RBP12.26□□□□□ -0.45
NPC2-209ENST00000557510 CCDC87Q9NVE4 849 aa12.26□□□□□ -0.45
NPC2-209ENST00000557510 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
NPC2-209ENST00000557510 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
NPC2-209ENST00000557510 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
NPC2-209ENST00000557510 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
NPC2-209ENST00000557510 KCNA3P22001 575 aa12.25□□□□□ -0.45
NPC2-209ENST00000557510 TGFB2P61812 414 aa12.25□□□□□ -0.45
NPC2-209ENST00000557510 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
NPC2-209ENST00000557510 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
NPC2-209ENST00000557510 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
NPC2-209ENST00000557510 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
NPC2-209ENST00000557510 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
NPC2-209ENST00000557510 SBF1O95248 1867 aa12.23□□□□□ -0.45
NPC2-209ENST00000557510 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
NPC2-209ENST00000557510 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
NPC2-209ENST00000557510 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
NPC2-209ENST00000557510 KIF3CO14782 793 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 FCHSD2O94868 740 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 TM4SF1P30408 202 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 CHRNA5P30532 468 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
NPC2-209ENST00000557510 COL15A1P39059 1388 aa12.21□□□□□ -0.45
NPC2-209ENST00000557510 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
NPC2-209ENST00000557510 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
NPC2-209ENST00000557510 DLEC1Q9Y238 1755 aa12.2□□□□□ -0.46
NPC2-209ENST00000557510 NFIXQ14938 502 aa12.2□□□□□ -0.46
NPC2-209ENST00000557510 CCDC88AQ3V6T2 1871 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
NPC2-209ENST00000557510 ZPR1O75312 459 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
NPC2-209ENST00000557510 ZNF496Q96IT1 587 aaPredicted RBP12.19□□□□□ -0.46
NPC2-209ENST00000557510 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
NPC2-209ENST00000557510 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
NPC2-209ENST00000557510 HSPA6P17066 643 aa12.18□□□□□ -0.46
NPC2-209ENST00000557510 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
NPC2-209ENST00000557510 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
NPC2-209ENST00000557510 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
NPC2-209ENST00000557510 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
NPC2-209ENST00000557510 KCNQ3O43525 872 aa12.17□□□□□ -0.46
NPC2-209ENST00000557510 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
NPC2-209ENST00000557510 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
NPC2-209ENST00000557510 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
NPC2-209ENST00000557510 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
NPC2-209ENST00000557510 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
NPC2-209ENST00000557510 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
NPC2-209ENST00000557510 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPC2-209ENST00000557510 EIF5P55010 431 aaKnown RBP12.16□□□□□ -0.46
NPC2-209ENST00000557510 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
NPC2-209ENST00000557510 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
NPC2-209ENST00000557510 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
NPC2-209ENST00000557510 HEG1Q9ULI3 1381 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms