RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
SLIRP-210ENST00000557431 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
SLIRP-210ENST00000557431 AKAP4Q5JQC9 854 aa19.19■□□□□ 0.66
SLIRP-210ENST00000557431 KIF7Q2M1P5 1343 aa19.19■□□□□ 0.66
SLIRP-210ENST00000557431 PIM2Q9P1W9 311 aa19.18■□□□□ 0.66
SLIRP-210ENST00000557431 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
SLIRP-210ENST00000557431 MTHFSDQ2M296 383 aaKnown RBP19.17■□□□□ 0.66
SLIRP-210ENST00000557431 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
SLIRP-210ENST00000557431 ZBTB1Q9Y2K1 713 aa19.17■□□□□ 0.66
SLIRP-210ENST00000557431 COL11A2P13942 1736 aaPredicted RBP19.17■□□□□ 0.66
SLIRP-210ENST00000557431 CYP19A1P11511 503 aaPredicted RBP19.16■□□□□ 0.66
SLIRP-210ENST00000557431 HTRA3P83110 453 aa19.16■□□□□ 0.66
SLIRP-210ENST00000557431 RASSF7Q02833 373 aa19.16■□□□□ 0.66
SLIRP-210ENST00000557431 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
SLIRP-210ENST00000557431 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
SLIRP-210ENST00000557431 COL15A1P39059 1388 aa19.16■□□□□ 0.66
SLIRP-210ENST00000557431 SCN7AQ01118 1682 aa19.15■□□□□ 0.66
SLIRP-210ENST00000557431 ZPR1O75312 459 aa19.15■□□□□ 0.66
SLIRP-210ENST00000557431 TOMM70O94826 608 aa19.15■□□□□ 0.66
SLIRP-210ENST00000557431 TM4SF1P30408 202 aa19.15■□□□□ 0.66
SLIRP-210ENST00000557431 DICER1Q9UPY3 1922 aaKnown RBP19.14■□□□□ 0.65
SLIRP-210ENST00000557431 NFIXQ14938 502 aa19.14■□□□□ 0.65
SLIRP-210ENST00000557431 BCL2L12Q9HB09 334 aa19.14■□□□□ 0.65
SLIRP-210ENST00000557431 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.65
SLIRP-210ENST00000557431 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
SLIRP-210ENST00000557431 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
SLIRP-210ENST00000557431 APLP1P51693 650 aa19.11■□□□□ 0.65
SLIRP-210ENST00000557431 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
SLIRP-210ENST00000557431 RRAGCQ9HB90 399 aa19.11■□□□□ 0.65
SLIRP-210ENST00000557431 FER1L6Q2WGJ9 1857 aa19.11■□□□□ 0.65
SLIRP-210ENST00000557431 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
SLIRP-210ENST00000557431 DIAPH1O60610 1272 aaKnown RBP19.1■□□□□ 0.65
SLIRP-210ENST00000557431 PRELPP51888 382 aa19.1■□□□□ 0.65
SLIRP-210ENST00000557431 NARFQ9UHQ1 456 aa19.1■□□□□ 0.65
SLIRP-210ENST00000557431 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
SLIRP-210ENST00000557431 SERPINB2P05120 415 aa19.09■□□□□ 0.65
SLIRP-210ENST00000557431 CCDC24Q8N4L8 307 aa19.09■□□□□ 0.65
SLIRP-210ENST00000557431 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.64
SLIRP-210ENST00000557431 DNAJC5GQ8N7S2 189 aa19.08■□□□□ 0.64
SLIRP-210ENST00000557431 ZNF330Q9Y3S2 320 aaPredicted RBP19.08■□□□□ 0.64
SLIRP-210ENST00000557431 SLX4Q8IY92 1834 aa19.08■□□□□ 0.64
SLIRP-210ENST00000557431 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
SLIRP-210ENST00000557431 RBM46Q8TBY0 533 aaKnown RBP19.06■□□□□ 0.64
SLIRP-210ENST00000557431 ZNF219Q9P2Y4 722 aaPredicted RBP19.06■□□□□ 0.64
SLIRP-210ENST00000557431 KDM2BQ8NHM5 1336 aa19.05■□□□□ 0.64
SLIRP-210ENST00000557431 C2CD5Q86YS7 1000 aa19.05■□□□□ 0.64
SLIRP-210ENST00000557431 ZNF496Q96IT1 587 aaPredicted RBP19.05■□□□□ 0.64
SLIRP-210ENST00000557431 ARFGEF2Q9Y6D5 1785 aa19.05■□□□□ 0.64
SLIRP-210ENST00000557431 DLG5Q8TDM6 1919 aa19.04■□□□□ 0.64
SLIRP-210ENST00000557431 TBC1D9BQ66K14 1250 aa19.04■□□□□ 0.64
SLIRP-210ENST00000557431 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
SLIRP-210ENST00000557431 IL17REQ8NFR9 667 aa19.04■□□□□ 0.64
SLIRP-210ENST00000557431 KCNQ3O43525 872 aa19.03■□□□□ 0.64
SLIRP-210ENST00000557431 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
SLIRP-210ENST00000557431 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
SLIRP-210ENST00000557431 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
SLIRP-210ENST00000557431 EIF5P55010 431 aaKnown RBP19.02■□□□□ 0.64
SLIRP-210ENST00000557431 VSIG10Q8N0Z9 540 aa19.02■□□□□ 0.64
SLIRP-210ENST00000557431 NFKBIEO00221 500 aa19.01■□□□□ 0.63
SLIRP-210ENST00000557431 TEFQ10587 303 aa19.01■□□□□ 0.63
SLIRP-210ENST00000557431 TTLL6Q8N841 843 aa19.01■□□□□ 0.63
SLIRP-210ENST00000557431 GNAT3A8MTJ3 354 aa19■□□□□ 0.63
SLIRP-210ENST00000557431 A1BGP04217 495 aa19■□□□□ 0.63
SLIRP-210ENST00000557431 ZNF790Q6PG37 636 aa19■□□□□ 0.63
SLIRP-210ENST00000557431 ZNF622Q969S3 477 aaKnown RBP eCLIP19■□□□□ 0.63
SLIRP-210ENST00000557431 H0YIN7 160 aa18.99■□□□□ 0.63
SLIRP-210ENST00000557431 STARD3NLO95772 234 aa18.99■□□□□ 0.63
SLIRP-210ENST00000557431 LMNB1P20700 586 aa18.99■□□□□ 0.63
SLIRP-210ENST00000557431 KLRG1Q96E93 195 aa18.99■□□□□ 0.63
SLIRP-210ENST00000557431 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
SLIRP-210ENST00000557431 FSTL1Q12841 308 aa18.98■□□□□ 0.63
SLIRP-210ENST00000557431 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
SLIRP-210ENST00000557431 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
SLIRP-210ENST00000557431 GAS2L2Q8NHY3 880 aa18.97■□□□□ 0.63
SLIRP-210ENST00000557431 C21orf2O43822 256 aa18.96■□□□□ 0.63
SLIRP-210ENST00000557431 PRKAR2BP31323 418 aa18.96■□□□□ 0.63
SLIRP-210ENST00000557431 LAMB4A4D0S4 1761 aa18.96■□□□□ 0.63
SLIRP-210ENST00000557431 A0A087WZG4 1122 aa18.95■□□□□ 0.62
SLIRP-210ENST00000557431 GLTPD2A6NH11 291 aa18.95■□□□□ 0.62
SLIRP-210ENST00000557431 SMC1BQ8NDV3 1235 aa18.95■□□□□ 0.62
SLIRP-210ENST00000557431 NUP98P52948 1817 aa18.95■□□□□ 0.62
SLIRP-210ENST00000557431 CEMIPQ8WUJ3 1361 aa18.94■□□□□ 0.62
SLIRP-210ENST00000557431 CAMTA2O94983 1202 aa18.94■□□□□ 0.62
SLIRP-210ENST00000557431 FMNL2Q96PY5 1086 aa18.94■□□□□ 0.62
SLIRP-210ENST00000557431 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
SLIRP-210ENST00000557431 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
SLIRP-210ENST00000557431 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
SLIRP-210ENST00000557431 POTECB2RU33 542 aa18.93■□□□□ 0.62
SLIRP-210ENST00000557431 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
SLIRP-210ENST00000557431 USP16Q9Y5T5 823 aa18.93■□□□□ 0.62
SLIRP-210ENST00000557431 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
SLIRP-210ENST00000557431 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
SLIRP-210ENST00000557431 MCM10Q7L590 875 aa18.92■□□□□ 0.62
SLIRP-210ENST00000557431 ZC3H4Q9UPT8 1303 aaKnown RBP18.92■□□□□ 0.62
SLIRP-210ENST00000557431 NPHP1O15259 732 aa18.91■□□□□ 0.62
SLIRP-210ENST00000557431 VEGFAP15692 232 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-210ENST00000557431 PDE6BP35913 854 aa18.91■□□□□ 0.62
SLIRP-210ENST00000557431 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
SLIRP-210ENST00000557431 JMYQ8N9B5 988 aa18.91■□□□□ 0.62
SLIRP-210ENST00000557431 CNBD1Q8NA66 436 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms