RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 RNF217Q8TC41 542 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 ZFP42Q96MM3 310 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 ZNF395Q9H8N7 513 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 CABP1Q9NZU7 370 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 ANKIB1Q9P2G1 1089 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 SERTAD1Q9UHV2 236 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 SHROOM4Q9ULL8 1493 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 GJA3Q9Y6H8 435 aa5.1□□□□□ -1.59
HMGB1P14-201ENST00000557424 SFI1A8K8P3 1242 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 POTECB2RU33 542 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 C11orf95C9JLR9 678 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 ZBTB7BO15156 539 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 BMP1P13497 986 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 TEAD4Q15561 434 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 CDCA8Q53HL2 280 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 EFHC2Q5JST6 749 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 C1orf53Q5VUE5 145 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 SLC9A9Q8IVB4 645 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 NPAS3Q8IXF0 933 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 GRIP2Q9C0E4 1043 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 TIMMDC1Q9NPL8 285 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 FAM13BQ9NYF5 915 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 KIAA1024Q9UPX6 916 aa5.09□□□□□ -1.59
HMGB1P14-201ENST00000557424 E9PSI1 815 aa5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 ARID4AP29374 1257 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 NBPF10Q6P3W6 841 aaKnown RBP5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 TSEN2Q8NCE0 465 aaKnown RBP5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 STK32AQ8WU08 396 aa5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 FHDC1Q9C0D6 1143 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 ZMIZ1Q9ULJ6 1067 aa5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 PHF24Q9UPV7 400 aa5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 DYRK1BQ9Y463 629 aa5.08□□□□□ -1.6
HMGB1P14-201ENST00000557424 ATAD2Q6PL18 1390 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 ST8SIA5O15466 376 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 EPB42P16452 691 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 WEE1P30291 646 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 CTSOP43234 321 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 PLA2G4AP47712 749 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 FOXK2Q01167 660 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 BICDL1Q6ZP65 573 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 TRIM46Q7Z4K8 759 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 ABTB2Q8N961 1025 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 SCG3Q8WXD2 468 aaKnown RBP5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 CXXC1Q9P0U4 656 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 HRH3Q9Y5N1 445 aa5.07□□□□□ -1.6
HMGB1P14-201ENST00000557424 UNCXA6NJT0 531 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 EPHA4P54764 986 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 SF3B2Q13435 895 aaKnown RBP5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 RTN1Q16799 776 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 TNS4Q8IZW8 715 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 SLC16A10Q8TF71 515 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 CHMP7Q8WUX9 453 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 L3MBTL2Q969R5 705 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 TRERF1Q96PN7 1200 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 TSPAN10Q9H1Z9 355 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 EGFL7Q9UHF1 273 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 IVNS1ABPQ9Y6Y0 642 aa5.06□□□□□ -1.6
HMGB1P14-201ENST00000557424 PRMT3O60678 531 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 DKK1O94907 266 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 F11P03951 625 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 RPLP1P05386 114 aaKnown RBP5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 PCSK2P16519 638 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 NOS2P35228 1153 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 NEUROD1Q13562 356 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 ARSJQ5FYB0 599 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 ALKBH2Q6NS38 261 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 NLRP8Q86W28 1048 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 KDF1Q8NAX2 398 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 TTC16Q8NEE8 873 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 AIDAQ96BJ3 306 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 C2orf49Q9BVC5 232 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 BCL11AQ9H165 835 aa5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 NSFL1CQ9UNZ2 370 aaKnown RBP5.05□□□□□ -1.6
HMGB1P14-201ENST00000557424 TMEM88BA6NKF7 163 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 SSFA2P28290 1259 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 C4orf17Q53FE4 359 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 IER5Q5VY09 327 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 C16orf46Q6P387 395 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 MYO19Q96H55 970 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 EFCC1Q9HA90 598 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 DNMT3LQ9UJW3 386 aa5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 IQSEC3Q9UPP2 1182 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P14-201ENST00000557424 POU4F2Q12837 409 aa5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 POTEAQ6S8J7 498 aa5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 CRISPLD1Q9H336 500 aa5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 C11orf16Q9NQ32 467 aa5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 USP35Q9P2H5 1018 aa5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 GMPR2Q9P2T1 348 aaKnown RBP5.03□□□□□ -1.6
HMGB1P14-201ENST00000557424 FIGNL2A6NMB9 653 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 EML1O00423 815 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 FAM13AO94988 1023 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 BRD2P25440 801 aaKnown RBP5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 USP5P45974 858 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 PTSQ03393 145 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 FAM69CQ0P6D2 419 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 LAMC2Q13753 1193 aa5.02□□□□□ -1.61
HMGB1P14-201ENST00000557424 OCLNQ16625 522 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms