RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 PLEKHO1Q53GL0 409 aaPredicted RBP27.62■■■□□ 2.01
RCCD1-208ENST00000557266 MPRIPQ6WCQ1 1025 aa27.62■■■□□ 2.01
RCCD1-208ENST00000557266 GAS2L3Q86XJ1 694 aa27.62■■■□□ 2.01
RCCD1-208ENST00000557266 DNAAF4Q8WXU2 420 aa27.62■■■□□ 2.01
RCCD1-208ENST00000557266 ORAI2Q96SN7 254 aa27.62■■■□□ 2.01
RCCD1-208ENST00000557266 PXDNQ92626 1479 aa27.62■■■□□ 2.01
RCCD1-208ENST00000557266 PI4KAP2A4QPH2 592 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 RAB11FIP3O75154 756 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 NBPF7P0C2Y1 421 aaPredicted RBP27.61■■■□□ 2.01
RCCD1-208ENST00000557266 ARHGEF25Q86VW2 580 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 PI4KAP1Q8N8J0 262 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 AK9Q5TCS8 1911 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 XPCQ01831 940 aaPredicted RBP27.61■■■□□ 2.01
RCCD1-208ENST00000557266 SLIT3O75094 1523 aa27.61■■■□□ 2.01
RCCD1-208ENST00000557266 SURF6O75683 361 aaKnown RBP27.6■■■□□ 2.01
RCCD1-208ENST00000557266 PALD1Q9ULE6 856 aa27.6■■■□□ 2.01
RCCD1-208ENST00000557266 ANXA1P04083 346 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 NUTM1Q86Y26 1132 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 CHMP4AQ9BY43 222 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 ADCY9O60503 1353 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 NEK4P51957 841 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 AMOTQ4VCS5 1084 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 ANO2Q9NQ90 1003 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 KIF1AQ12756 1690 aa27.59■■■□□ 2.01
RCCD1-208ENST00000557266 SRGAP3O43295 1099 aa27.58■■■□□ 2.01
RCCD1-208ENST00000557266 C1orf167Q5SNV9 1468 aa27.58■■■□□ 2.01
RCCD1-208ENST00000557266 RNMTO43148 476 aaKnown RBP27.58■■■□□ 2.01
RCCD1-208ENST00000557266 KLHL40Q2TBA0 621 aa27.58■■■□□ 2.01
RCCD1-208ENST00000557266 RHPN1Q8TCX5 695 aa27.58■■■□□ 2.01
RCCD1-208ENST00000557266 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
RCCD1-208ENST00000557266 RRAGDQ9NQL2 400 aaPredicted RBP27.57■■■□□ 2
RCCD1-208ENST00000557266 MCCP23508 829 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 ANAPC15P60006 121 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 MCTP1Q6DN14 999 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 ZDHHC9Q9Y397 364 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 PLEKHG5O94827 1062 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 ATF3P18847 181 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 IL25Q9H293 177 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 MST1RQ04912 1400 aa27.56■■■□□ 2
RCCD1-208ENST00000557266 PI4K2BQ8TCG2 481 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 ANKRD24Q8TF21 1146 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 IL17RAQ96F46 866 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 TMX3Q96JJ7 454 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 DDX49Q9Y6V7 483 aaKnown RBP27.55■■■□□ 2
RCCD1-208ENST00000557266 OVOS2A0A0G2JMS6 1433 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 C1orf141Q5JVX7 400 aa27.55■■■□□ 2
RCCD1-208ENST00000557266 KIF1BPQ96EK5 621 aa27.54■■■□□ 2
RCCD1-208ENST00000557266 DBF4Q9UBU7 674 aaPredicted RBP27.53■■■□□ 2
RCCD1-208ENST00000557266 MCM2P49736 904 aa27.53■■■□□ 2
RCCD1-208ENST00000557266 LMBRD1Q9NUN5 540 aa27.53■■■□□ 2
RCCD1-208ENST00000557266 CADPS2Q86UW7 1296 aa27.52■■■□□ 2
RCCD1-208ENST00000557266 HEG1Q9ULI3 1381 aa27.52■■■□□ 2
RCCD1-208ENST00000557266 AXIN2Q9Y2T1 843 aa27.52■■■□□ 2
RCCD1-208ENST00000557266 CAMTA1Q9Y6Y1 1673 aa27.51■■□□□ 1.99
RCCD1-208ENST00000557266 GIGYF1O75420 1035 aaPredicted RBP27.51■■□□□ 1.99
RCCD1-208ENST00000557266 LMOD2Q6P5Q4 547 aa27.51■■□□□ 1.99
RCCD1-208ENST00000557266 PROSER3Q2NL68 480 aa27.5■■□□□ 1.99
RCCD1-208ENST00000557266 MAP4K4O95819 1239 aaPredicted RBP27.5■■□□□ 1.99
RCCD1-208ENST00000557266 CUL4AQ13619 759 aa27.49■■□□□ 1.99
RCCD1-208ENST00000557266 TRPM3Q9HCF6 1732 aaPredicted RBP27.49■■□□□ 1.99
RCCD1-208ENST00000557266 EPB41L2O43491 1005 aaKnown RBP27.49■■□□□ 1.99
RCCD1-208ENST00000557266 MTX1Q13505 466 aa27.48■■□□□ 1.99
RCCD1-208ENST00000557266 MAP3K2Q9Y2U5 619 aa27.48■■□□□ 1.99
RCCD1-208ENST00000557266 PRAMEF22A3QJZ6 481 aa27.47■■□□□ 1.99
RCCD1-208ENST00000557266 HSP90AB4PQ58FF6 505 aa27.47■■□□□ 1.99
RCCD1-208ENST00000557266 HSPA4P34932 840 aa27.46■■□□□ 1.99
RCCD1-208ENST00000557266 USP42Q9H9J4 1324 aaKnown RBP27.46■■□□□ 1.99
RCCD1-208ENST00000557266 KSR2Q6VAB6 950 aa27.46■■□□□ 1.99
RCCD1-208ENST00000557266 UPF3BQ9BZI7 483 aaKnown RBP27.46■■□□□ 1.99
RCCD1-208ENST00000557266 ALDH1L1O75891 902 aa27.45■■□□□ 1.98
RCCD1-208ENST00000557266 KRT28Q7Z3Y7 464 aa27.45■■□□□ 1.98
RCCD1-208ENST00000557266 SGSM2O43147 1006 aa27.44■■□□□ 1.98
RCCD1-208ENST00000557266 NOL8Q76FK4 1167 aaKnown RBP27.44■■□□□ 1.98
RCCD1-208ENST00000557266 SIPA1L3O60292 1781 aaPredicted RBP27.43■■□□□ 1.98
RCCD1-208ENST00000557266 CNTROBQ8N137 903 aa27.43■■□□□ 1.98
RCCD1-208ENST00000557266 INTS4Q96HW7 963 aaKnown RBP27.43■■□□□ 1.98
RCCD1-208ENST00000557266 CHAMP1Q96JM3 812 aa27.43■■□□□ 1.98
RCCD1-208ENST00000557266 RAD50Q92878 1312 aa27.43■■□□□ 1.98
RCCD1-208ENST00000557266 CRYBG1Q9Y4K1 1723 aa27.43■■□□□ 1.98
RCCD1-208ENST00000557266 CAVIN1Q6NZI2 390 aaKnown RBP27.43■■□□□ 1.98
RCCD1-208ENST00000557266 ADAMTS7Q9UKP4 1686 aa27.42■■□□□ 1.98
RCCD1-208ENST00000557266 PRPF40AO75400 957 aaKnown RBP27.42■■□□□ 1.98
RCCD1-208ENST00000557266 CWF19L2Q2TBE0 894 aaKnown RBP27.42■■□□□ 1.98
RCCD1-208ENST00000557266 ANO8Q9HCE9 1232 aaPredicted RBP27.42■■□□□ 1.98
RCCD1-208ENST00000557266 C9orf78Q9NZ63 289 aaPredicted RBP27.42■■□□□ 1.98
RCCD1-208ENST00000557266 ZNF445P59923 1031 aa27.41■■□□□ 1.98
RCCD1-208ENST00000557266 OS9Q13438 667 aaPredicted RBP27.41■■□□□ 1.98
RCCD1-208ENST00000557266 ERBB3P21860 1342 aa27.41■■□□□ 1.98
RCCD1-208ENST00000557266 TTC41PQ6P2S7 1318 aa27.41■■□□□ 1.98
RCCD1-208ENST00000557266 BRD1O95696 1058 aa27.41■■□□□ 1.98
RCCD1-208ENST00000557266 HYPKQ9NX55 129 aa27.41■■□□□ 1.98
RCCD1-208ENST00000557266 NCLP19338 710 aaKnown RBP27.4■■□□□ 1.98
RCCD1-208ENST00000557266 GPT2Q8TD30 523 aa27.4■■□□□ 1.98
RCCD1-208ENST00000557266 LSG1Q9H089 658 aaKnown RBP27.4■■□□□ 1.98
RCCD1-208ENST00000557266 ZSCAN23Q3MJ62 389 aa27.4■■□□□ 1.98
RCCD1-208ENST00000557266 FOXD4L5Q5VV16 416 aaPredicted RBP27.4■■□□□ 1.98
RCCD1-208ENST00000557266 FOXD4L4Q8WXT5 416 aaPredicted RBP27.4■■□□□ 1.98
RCCD1-208ENST00000557266 GLRX3O76003 335 aaKnown RBP27.38■■□□□ 1.97
RCCD1-208ENST00000557266 PA2G4Q9UQ80 394 aaKnown RBP27.38■■□□□ 1.97
RCCD1-208ENST00000557266 ZC3H6P61129 1189 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms