RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
RIPK3-205ENST00000557253 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.29
RIPK3-205ENST00000557253 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
RIPK3-205ENST00000557253 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
RIPK3-205ENST00000557253 NFIXQ14938 502 aa13.25□□□□□ -0.29
RIPK3-205ENST00000557253 SOS1Q07889 1333 aaPredicted RBP13.24□□□□□ -0.29
RIPK3-205ENST00000557253 ZC3H4Q9UPT8 1303 aaKnown RBP13.24□□□□□ -0.29
RIPK3-205ENST00000557253 POTECB2RU33 542 aa13.24□□□□□ -0.29
RIPK3-205ENST00000557253 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
RIPK3-205ENST00000557253 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
RIPK3-205ENST00000557253 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
RIPK3-205ENST00000557253 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 NFKBIEO00221 500 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 SERPINB2P05120 415 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
RIPK3-205ENST00000557253 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
RIPK3-205ENST00000557253 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 SCN11AQ9UI33 1791 aa13.22□□□□□ -0.29
RIPK3-205ENST00000557253 COL15A1P39059 1388 aa13.21□□□□□ -0.29
RIPK3-205ENST00000557253 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
RIPK3-205ENST00000557253 H0YIN7 160 aa13.21□□□□□ -0.29
RIPK3-205ENST00000557253 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
RIPK3-205ENST00000557253 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
RIPK3-205ENST00000557253 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
RIPK3-205ENST00000557253 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
RIPK3-205ENST00000557253 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
RIPK3-205ENST00000557253 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
RIPK3-205ENST00000557253 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
RIPK3-205ENST00000557253 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
RIPK3-205ENST00000557253 C21orf2O43822 256 aa13.19□□□□□ -0.3
RIPK3-205ENST00000557253 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
RIPK3-205ENST00000557253 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
RIPK3-205ENST00000557253 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
RIPK3-205ENST00000557253 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
RIPK3-205ENST00000557253 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
RIPK3-205ENST00000557253 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
RIPK3-205ENST00000557253 PANK3Q9H999 370 aa13.18□□□□□ -0.3
RIPK3-205ENST00000557253 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
RIPK3-205ENST00000557253 FOXN1O15353 648 aa13.17□□□□□ -0.3
RIPK3-205ENST00000557253 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
RIPK3-205ENST00000557253 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
RIPK3-205ENST00000557253 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
RIPK3-205ENST00000557253 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
RIPK3-205ENST00000557253 IL13P35225 146 aa13.16□□□□□ -0.3
RIPK3-205ENST00000557253 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
RIPK3-205ENST00000557253 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
RIPK3-205ENST00000557253 FER1L6Q2WGJ9 1857 aa13.15□□□□□ -0.3
RIPK3-205ENST00000557253 COL11A2P13942 1736 aaPredicted RBP13.15□□□□□ -0.3
RIPK3-205ENST00000557253 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
RIPK3-205ENST00000557253 HMOX1P09601 288 aa13.14□□□□□ -0.31
RIPK3-205ENST00000557253 PDE6BP35913 854 aa13.14□□□□□ -0.31
RIPK3-205ENST00000557253 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
RIPK3-205ENST00000557253 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
RIPK3-205ENST00000557253 MRC1P22897 1456 aa13.13□□□□□ -0.31
RIPK3-205ENST00000557253 CNTNAP1P78357 1384 aa13.13□□□□□ -0.31
RIPK3-205ENST00000557253 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
RIPK3-205ENST00000557253 TAOK3Q9H2K8 898 aa13.13□□□□□ -0.31
RIPK3-205ENST00000557253 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
RIPK3-205ENST00000557253 VEGFBP49765 207 aa13.12□□□□□ -0.31
RIPK3-205ENST00000557253 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
RIPK3-205ENST00000557253 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
RIPK3-205ENST00000557253 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
RIPK3-205ENST00000557253 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
RIPK3-205ENST00000557253 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
RIPK3-205ENST00000557253 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
RIPK3-205ENST00000557253 A0A087WZG4 1122 aa13.11□□□□□ -0.31
RIPK3-205ENST00000557253 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
RIPK3-205ENST00000557253 UBR2Q8IWV8 1755 aa13.11□□□□□ -0.31
RIPK3-205ENST00000557253 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
RIPK3-205ENST00000557253 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 NPHP1O15259 732 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 STARD3NLO95772 234 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
RIPK3-205ENST00000557253 LBX1P52954 281 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
RIPK3-205ENST00000557253 PRPF40BQ6NWY9 871 aaKnown RBP13.1□□□□□ -0.31
RIPK3-205ENST00000557253 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
RIPK3-205ENST00000557253 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
RIPK3-205ENST00000557253 LDHDQ86WU2 507 aa13.09□□□□□ -0.31
RIPK3-205ENST00000557253 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
RIPK3-205ENST00000557253 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
RIPK3-205ENST00000557253 IQCA1LA6NCM1 817 aa13.08□□□□□ -0.32
RIPK3-205ENST00000557253 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
RIPK3-205ENST00000557253 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
RIPK3-205ENST00000557253 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
RIPK3-205ENST00000557253 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
RIPK3-205ENST00000557253 A1BGP04217 495 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 SRGNP10124 158 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
RIPK3-205ENST00000557253 ST5P78524 1137 aa13.07□□□□□ -0.32
RIPK3-205ENST00000557253 STYK1Q6J9G0 422 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms