RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
PSEN1-219ENST00000556951 ADRA2BP18089 450 aa17.53■□□□□ 0.4
PSEN1-219ENST00000556951 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
PSEN1-219ENST00000556951 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
PSEN1-219ENST00000556951 DEFB115Q30KQ5 88 aa17.52■□□□□ 0.4
PSEN1-219ENST00000556951 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
PSEN1-219ENST00000556951 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
PSEN1-219ENST00000556951 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
PSEN1-219ENST00000556951 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
PSEN1-219ENST00000556951 ERVV-2B6SEH9 535 aa17.51■□□□□ 0.39
PSEN1-219ENST00000556951 RFC4P35249 363 aa17.51■□□□□ 0.39
PSEN1-219ENST00000556951 THSD7BQ9C0I4 1608 aa17.5■□□□□ 0.39
PSEN1-219ENST00000556951 DDR1Q08345 913 aa17.5■□□□□ 0.39
PSEN1-219ENST00000556951 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
PSEN1-219ENST00000556951 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
PSEN1-219ENST00000556951 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
PSEN1-219ENST00000556951 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
PSEN1-219ENST00000556951 EIF4A2Q14240 407 aaKnown RBP17.49■□□□□ 0.39
PSEN1-219ENST00000556951 CASP8AP2Q9UKL3 1982 aa17.49■□□□□ 0.39
PSEN1-219ENST00000556951 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-219ENST00000556951 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
PSEN1-219ENST00000556951 CHRNA5P30532 468 aa17.48■□□□□ 0.39
PSEN1-219ENST00000556951 FKBP8Q14318 412 aa17.48■□□□□ 0.39
PSEN1-219ENST00000556951 GCC1Q96CN9 775 aa17.48■□□□□ 0.39
PSEN1-219ENST00000556951 BEGAINQ9BUH8 593 aa17.48■□□□□ 0.39
PSEN1-219ENST00000556951 TM4SF1P30408 202 aa17.47■□□□□ 0.39
PSEN1-219ENST00000556951 ITGBL1O95965 494 aaPredicted RBP17.46■□□□□ 0.39
PSEN1-219ENST00000556951 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
PSEN1-219ENST00000556951 LTBP1Q14766 1721 aa17.45■□□□□ 0.38
PSEN1-219ENST00000556951 CRKLP46109 303 aaKnown RBP17.45■□□□□ 0.38
PSEN1-219ENST00000556951 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
PSEN1-219ENST00000556951 SOX10P56693 466 aa17.44■□□□□ 0.38
PSEN1-219ENST00000556951 DGKZQ13574 1117 aa17.44■□□□□ 0.38
PSEN1-219ENST00000556951 CDCA8Q53HL2 280 aa17.44■□□□□ 0.38
PSEN1-219ENST00000556951 LDHDQ86WU2 507 aa17.44■□□□□ 0.38
PSEN1-219ENST00000556951 POLRMTO00411 1230 aaKnown RBP17.43■□□□□ 0.38
PSEN1-219ENST00000556951 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
PSEN1-219ENST00000556951 CABP4P57796 275 aa17.43■□□□□ 0.38
PSEN1-219ENST00000556951 INTS5Q6P9B9 1019 aaKnown RBP17.43■□□□□ 0.38
PSEN1-219ENST00000556951 TSKSQ9UJT2 592 aa17.43■□□□□ 0.38
PSEN1-219ENST00000556951 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
PSEN1-219ENST00000556951 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-219ENST00000556951 HABP4Q5JVS0 413 aaKnown RBP17.41■□□□□ 0.38
PSEN1-219ENST00000556951 NFATC2IPQ8NCF5 419 aa17.41■□□□□ 0.38
PSEN1-219ENST00000556951 ADAMTS7Q9UKP4 1686 aa17.41■□□□□ 0.38
PSEN1-219ENST00000556951 DLL1O00548 723 aa17.4■□□□□ 0.38
PSEN1-219ENST00000556951 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
PSEN1-219ENST00000556951 SCN4AP35499 1836 aa17.4■□□□□ 0.38
PSEN1-219ENST00000556951 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-219ENST00000556951 NFKBIEO00221 500 aa17.38■□□□□ 0.37
PSEN1-219ENST00000556951 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-219ENST00000556951 MTHFSP49914 203 aa17.38■□□□□ 0.37
PSEN1-219ENST00000556951 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
PSEN1-219ENST00000556951 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
PSEN1-219ENST00000556951 ABT1Q9ULW3 272 aaKnown RBP17.37■□□□□ 0.37
PSEN1-219ENST00000556951 DLEC1Q9Y238 1755 aa17.37■□□□□ 0.37
PSEN1-219ENST00000556951 TJP1Q07157 1748 aa17.36■□□□□ 0.37
PSEN1-219ENST00000556951 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
PSEN1-219ENST00000556951 NFIXQ14938 502 aa17.36■□□□□ 0.37
PSEN1-219ENST00000556951 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
PSEN1-219ENST00000556951 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
PSEN1-219ENST00000556951 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
PSEN1-219ENST00000556951 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
PSEN1-219ENST00000556951 CA12O43570 354 aa17.35■□□□□ 0.37
PSEN1-219ENST00000556951 ECE1P42892 770 aa17.35■□□□□ 0.37
PSEN1-219ENST00000556951 DNAJC10Q8IXB1 793 aa17.35■□□□□ 0.37
PSEN1-219ENST00000556951 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
PSEN1-219ENST00000556951 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
PSEN1-219ENST00000556951 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
PSEN1-219ENST00000556951 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
PSEN1-219ENST00000556951 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
PSEN1-219ENST00000556951 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
PSEN1-219ENST00000556951 ZPR1O75312 459 aa17.32■□□□□ 0.36
PSEN1-219ENST00000556951 NBPF15Q8N660 670 aa17.32■□□□□ 0.36
PSEN1-219ENST00000556951 NARFQ9UHQ1 456 aa17.32■□□□□ 0.36
PSEN1-219ENST00000556951 AFDNP55196 1824 aaKnown RBP17.32■□□□□ 0.36
PSEN1-219ENST00000556951 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
PSEN1-219ENST00000556951 SERPINB2P05120 415 aa17.31■□□□□ 0.36
PSEN1-219ENST00000556951 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSEN1-219ENST00000556951 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
PSEN1-219ENST00000556951 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
PSEN1-219ENST00000556951 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
PSEN1-219ENST00000556951 FER1L6Q2WGJ9 1857 aa17.31■□□□□ 0.36
PSEN1-219ENST00000556951 MAP2K2P36507 400 aa17.3■□□□□ 0.36
PSEN1-219ENST00000556951 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
PSEN1-219ENST00000556951 FXR1P51114 621 aaKnown RBP eCLIP17.29■□□□□ 0.36
PSEN1-219ENST00000556951 GRM1Q13255 1194 aa17.29■□□□□ 0.36
PSEN1-219ENST00000556951 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-219ENST00000556951 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
PSEN1-219ENST00000556951 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-219ENST00000556951 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 SLC39A6Q13433 755 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 EAPPQ56P03 285 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-219ENST00000556951 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 ZBTB1Q9Y2K1 713 aa17.28■□□□□ 0.36
PSEN1-219ENST00000556951 CUL9Q8IWT3 2517 aa17.27■□□□□ 0.36
PSEN1-219ENST00000556951 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms