RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-227ENST00000556897 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
HNRNPC-227ENST00000556897 NFIXQ14938 502 aa12.35□□□□□ -0.43
HNRNPC-227ENST00000556897 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
HNRNPC-227ENST00000556897 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
HNRNPC-227ENST00000556897 IL13P35225 146 aa12.34□□□□□ -0.43
HNRNPC-227ENST00000556897 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
HNRNPC-227ENST00000556897 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
HNRNPC-227ENST00000556897 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-227ENST00000556897 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 PRELPP51888 382 aa12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 SLC39A6Q13433 755 aa12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-227ENST00000556897 COL15A1P39059 1388 aa12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 CAPN15O75808 1086 aa12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 LMNB1P20700 586 aa12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 BCL2L12Q9HB09 334 aa12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-227ENST00000556897 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
HNRNPC-227ENST00000556897 ZBTB22O15209 634 aa12.31□□□□□ -0.44
HNRNPC-227ENST00000556897 SERPINB2P05120 415 aa12.31□□□□□ -0.44
HNRNPC-227ENST00000556897 C2CD5Q86YS7 1000 aa12.31□□□□□ -0.44
HNRNPC-227ENST00000556897 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
HNRNPC-227ENST00000556897 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 MRC1P22897 1456 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 HMOX1P09601 288 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 NRXN2Q9P2S2 1712 aa12.3□□□□□ -0.44
HNRNPC-227ENST00000556897 H0YIN7 160 aa12.29□□□□□ -0.44
HNRNPC-227ENST00000556897 NFKBIEO00221 500 aa12.29□□□□□ -0.44
HNRNPC-227ENST00000556897 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-227ENST00000556897 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
HNRNPC-227ENST00000556897 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
HNRNPC-227ENST00000556897 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-227ENST00000556897 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
HNRNPC-227ENST00000556897 POTECB2RU33 542 aa12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 HSPA1AP0DMV8 641 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 HSPA1BP0DMV9 641 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 TIAM2Q8IVF5 1701 aa12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.45
HNRNPC-227ENST00000556897 VIRMAQ69YN4 1812 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-227ENST00000556897 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-227ENST00000556897 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
HNRNPC-227ENST00000556897 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.451e-21■□□□□ 9
HNRNPC-227ENST00000556897 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-227ENST00000556897 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
HNRNPC-227ENST00000556897 C21orf2O43822 256 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 STARD3NLO95772 234 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 DPY19L2Q6NUT2 758 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 TTC5Q8N0Z6 440 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-227ENST00000556897 A0A087WZG4 1122 aa12.24□□□□□ -0.45
HNRNPC-227ENST00000556897 UBR2Q8IWV8 1755 aa12.24□□□□□ -0.45
HNRNPC-227ENST00000556897 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
HNRNPC-227ENST00000556897 ANKRD31Q8N7Z5 1873 aa12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 PDE6BP35913 854 aa12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
HNRNPC-227ENST00000556897 TAOK3Q9H2K8 898 aa12.22□□□□□ -0.45
HNRNPC-227ENST00000556897 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
HNRNPC-227ENST00000556897 COL11A2P13942 1736 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-227ENST00000556897 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 POTEJP0CG39 1038 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 TEFQ10587 303 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 IL17REQ8NFR9 667 aa12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 MKRN1Q9UHC7 482 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-227ENST00000556897 FER1L6Q2WGJ9 1857 aa12.21□□□□□ -0.46
HNRNPC-227ENST00000556897 SCN7AQ01118 1682 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 LTBP3Q9NS15 1303 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 NPHP1O15259 732 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 A1BGP04217 495 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 SETDB2Q96T68 719 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
HNRNPC-227ENST00000556897 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
HNRNPC-227ENST00000556897 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms