RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 C21orf2O43822 256 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 EPHX2P34913 555 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 MAP2K2P36507 400 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 RBM42Q9BTD8 480 aaKnown RBP6.23□□□□□ -1.41
ATXN3-242ENST00000556644 HACL1Q9UJ83 578 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 HPS5Q9UPZ3 1129 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 COLQQ9Y215 455 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-242ENST00000556644 U3KPZ7 1027 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-242ENST00000556644 ADAMTSL1Q8N6G6 1762 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 RNF123Q5XPI4 1314 aa6.23□□□□□ -1.41
ATXN3-242ENST00000556644 ITGB4P16144 1822 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 KTN1Q86UP2 1357 aaKnown RBP6.22□□□□□ -1.41
ATXN3-242ENST00000556644 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
ATXN3-242ENST00000556644 CYP27B1O15528 508 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 BRPF1P55201 1214 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-242ENST00000556644 CST9Q5W186 159 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 C2CD5Q86YS7 1000 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 L3MBTL3Q96JM7 780 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-242ENST00000556644 TLL2Q9Y6L7 1015 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 PCDH11XQ9BZA7 1347 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 PCDH11YQ9BZA8 1340 aa6.22□□□□□ -1.41
ATXN3-242ENST00000556644 CARMIL3Q8ND23 1372 aa6.21□□□□□ -1.41
ATXN3-242ENST00000556644 SCN4AP35499 1836 aa6.21□□□□□ -1.42
ATXN3-242ENST00000556644 RAPGEF4Q8WZA2 1011 aa6.21□□□□□ -1.42
ATXN3-242ENST00000556644 IP6K1Q92551 441 aa6.21□□□□□ -1.42
ATXN3-242ENST00000556644 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
ATXN3-242ENST00000556644 A0A0C4DFX4 3053 aa6.21□□□□□ -1.42
ATXN3-242ENST00000556644 CENPJQ9HC77 1338 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-242ENST00000556644 DICER1Q9UPY3 1922 aaKnown RBP6.21□□□□□ -1.42
ATXN3-242ENST00000556644 TATP17735 454 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-242ENST00000556644 FBLN1P23142 703 aa6.2□□□□□ -1.42
ATXN3-242ENST00000556644 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
ATXN3-242ENST00000556644 CTU1Q7Z7A3 348 aaKnown RBP6.2□□□□□ -1.42
ATXN3-242ENST00000556644 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-242ENST00000556644 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
ATXN3-242ENST00000556644 SLC4A9Q96Q91 983 aa6.2□□□□□ -1.42
ATXN3-242ENST00000556644 DLEC1Q9Y238 1755 aa6.2□□□□□ -1.42
ATXN3-242ENST00000556644 USP42Q9H9J4 1324 aaKnown RBP6.2□□□□□ -1.42
ATXN3-242ENST00000556644 SZT2Q5T011 3432 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 RPS6KA4O75676 772 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 BICDL1Q6ZP65 573 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 PNMA8AQ86V59 439 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-242ENST00000556644 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-242ENST00000556644 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 TMOD3Q9NYL9 352 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 CD163L1Q9NR16 1453 aa6.19□□□□□ -1.42
ATXN3-242ENST00000556644 KDRP35968 1356 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 FER1L6Q2WGJ9 1857 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 H0YIN7 160 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 TRPA1O75762 1119 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 CELF2O95319 508 aaKnown RBP6.18□□□□□ -1.42
ATXN3-242ENST00000556644 HOXC9P31274 260 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 SAPCD2Q86UD0 394 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 SYNE4Q8N205 404 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 CCDC24Q8N4L8 307 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 ATG3Q9NT62 314 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 MAP3K19Q56UN5 1328 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 CNTNAP4Q9C0A0 1308 aa6.18□□□□□ -1.42
ATXN3-242ENST00000556644 SCN11AQ9UI33 1791 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 TM4SF1P30408 202 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 AMPHP49418 695 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 MNX1P50219 401 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-242ENST00000556644 NFIXQ14938 502 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 USPL1Q5W0Q7 1092 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 COL25A1Q9BXS0 654 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-242ENST00000556644 LTBP3Q9NS15 1303 aa6.17□□□□□ -1.42
ATXN3-242ENST00000556644 MON2Q7Z3U7 1717 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 AFDNP55196 1824 aaKnown RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 TRPM7Q96QT4 1865 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 POTEFA5A3E0 1075 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 NOGQ13253 232 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 RC3H1Q5TC82 1133 aaKnown RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 LHX8Q68G74 356 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 ZNF277Q9NRM2 450 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 RNF186Q9NXI6 227 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 GJA3Q9Y6H8 435 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 MYH14Q7Z406 1995 aaKnown RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 CGNL1Q0VF96 1302 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 SBNO2Q9Y2G9 1366 aa6.16□□□□□ -1.42
ATXN3-242ENST00000556644 COL11A2P13942 1736 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 COL5A3P25940 1745 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-242ENST00000556644 CEP290O15078 2479 aa6.15□□□□□ -1.42
ATXN3-242ENST00000556644 SERPINB2P05120 415 aa6.15□□□□□ -1.42
ATXN3-242ENST00000556644 EPS15P42566 896 aa6.15□□□□□ -1.42
ATXN3-242ENST00000556644 CRKLP46109 303 aaKnown RBP6.15□□□□□ -1.42
ATXN3-242ENST00000556644 AKAP4Q5JQC9 854 aa6.15□□□□□ -1.42
ATXN3-242ENST00000556644 GLIS2Q9BZE0 524 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-242ENST00000556644 EVC2Q86UK5 1308 aa6.15□□□□□ -1.43
ATXN3-242ENST00000556644 SMG6Q86US8 1419 aaKnown RBP6.15□□□□□ -1.43
ATXN3-242ENST00000556644 H0YGN5 161 aa6.14□□□□□ -1.43
ATXN3-242ENST00000556644 ZPR1O75312 459 aa6.14□□□□□ -1.43
ATXN3-242ENST00000556644 KIF23Q02241 960 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-242ENST00000556644 RRS1Q15050 365 aaKnown RBP6.14□□□□□ -1.43
ATXN3-242ENST00000556644 PRPF40BQ6NWY9 871 aaKnown RBP6.14□□□□□ -1.43
ATXN3-242ENST00000556644 OLFM4Q6UX06 510 aa6.14□□□□□ -1.43
ATXN3-242ENST00000556644 SAGE1Q9NXZ1 904 aa6.14□□□□□ -1.43
ATXN3-242ENST00000556644 RAPGEFL1Q9UHV5 662 aa6.14□□□□□ -1.43
ATXN3-242ENST00000556644 HDAC9Q9UKV0 1011 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms