RNA–Protein interactions for RNA: ENST00000556641.5

CCNK-207, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-207ENST00000556641 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
CCNK-207ENST00000556641 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
CCNK-207ENST00000556641 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 PHF14O94880 888 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 RIPK4P57078 832 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 RUNDC1Q96C34 613 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 MRS2Q9HD23 443 aa13.21□□□□□ -0.29
CCNK-207ENST00000556641 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
CCNK-207ENST00000556641 MRC1P22897 1456 aa13.21□□□□□ -0.3
CCNK-207ENST00000556641 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
CCNK-207ENST00000556641 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
CCNK-207ENST00000556641 GNPATO15228 680 aa13.2□□□□□ -0.3
CCNK-207ENST00000556641 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
CCNK-207ENST00000556641 C5P01031 1676 aa13.2□□□□□ -0.3
CCNK-207ENST00000556641 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 VIRMAQ69YN4 1812 aaKnown RBP13.19□□□□□ -0.3
CCNK-207ENST00000556641 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
CCNK-207ENST00000556641 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
CCNK-207ENST00000556641 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
CCNK-207ENST00000556641 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
CCNK-207ENST00000556641 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
CCNK-207ENST00000556641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
CCNK-207ENST00000556641 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CCNK-207ENST00000556641 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
CCNK-207ENST00000556641 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
CCNK-207ENST00000556641 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
CCNK-207ENST00000556641 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
CCNK-207ENST00000556641 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
CCNK-207ENST00000556641 POTEMA6NI47 508 aa13.17□□□□□ -0.3
CCNK-207ENST00000556641 SSFA2P28290 1259 aa13.17□□□□□ -0.3
CCNK-207ENST00000556641 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
CCNK-207ENST00000556641 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
CCNK-207ENST00000556641 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
CCNK-207ENST00000556641 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
CCNK-207ENST00000556641 THUMPD2Q9BTF0 503 aaKnown RBP13.17□□□□□ -0.3
CCNK-207ENST00000556641 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 KCNQ3O43525 872 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 STARD3NLO95772 234 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 POLD1P28340 1107 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 TRAPPC3LQ5T215 181 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
CCNK-207ENST00000556641 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 CASZ1Q86V15 1759 aa13.16□□□□□ -0.3
CCNK-207ENST00000556641 LRP5O75197 1615 aa13.15□□□□□ -0.3
CCNK-207ENST00000556641 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
CCNK-207ENST00000556641 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
CCNK-207ENST00000556641 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
CCNK-207ENST00000556641 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
CCNK-207ENST00000556641 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 APAF1O14727 1248 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
CCNK-207ENST00000556641 RFC4P35249 363 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
CCNK-207ENST00000556641 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
CCNK-207ENST00000556641 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
CCNK-207ENST00000556641 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
CCNK-207ENST00000556641 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
CCNK-207ENST00000556641 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 PTGER2P43116 358 aa13.12□□□□□ -0.31
CCNK-207ENST00000556641 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
CCNK-207ENST00000556641 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 ARXQ96QS3 562 aa13.12□□□□□ -0.31
CCNK-207ENST00000556641 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
CCNK-207ENST00000556641 LAS1LQ9Y4W2 734 aaKnown RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
CCNK-207ENST00000556641 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
CCNK-207ENST00000556641 FAM9BQ8IZU0 186 aa13.11□□□□□ -0.31
CCNK-207ENST00000556641 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
CCNK-207ENST00000556641 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CCNK-207ENST00000556641 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
CCNK-207ENST00000556641 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
CCNK-207ENST00000556641 TJP1Q07157 1748 aa13.1□□□□□ -0.31
CCNK-207ENST00000556641 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
CCNK-207ENST00000556641 ZPR1O75312 459 aa13.1□□□□□ -0.31
CCNK-207ENST00000556641 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
CCNK-207ENST00000556641 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
CCNK-207ENST00000556641 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
CCNK-207ENST00000556641 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
CCNK-207ENST00000556641 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
CCNK-207ENST00000556641 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
CCNK-207ENST00000556641 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
CCNK-207ENST00000556641 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
CCNK-207ENST00000556641 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
CCNK-207ENST00000556641 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
CCNK-207ENST00000556641 A0A087WZG4 1122 aa13.08□□□□□ -0.32
CCNK-207ENST00000556641 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
CCNK-207ENST00000556641 A1BGP04217 495 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms