RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 MYH14Q7Z406 1995 aaKnown RBP13.22□□□□□ -0.29
CRX-203ENST00000556527 NPHP1O15259 732 aa13.22□□□□□ -0.29
CRX-203ENST00000556527 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
CRX-203ENST00000556527 TEFQ10587 303 aa13.22□□□□□ -0.29
CRX-203ENST00000556527 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
CRX-203ENST00000556527 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
CRX-203ENST00000556527 RRAGCQ9HB90 399 aa13.22□□□□□ -0.29
CRX-203ENST00000556527 KCPQ6ZWJ8 1503 aa13.22□□□□□ -0.29
CRX-203ENST00000556527 A0A087WZG4 1122 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 H0YIN7 160 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 SERPINB2P05120 415 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
CRX-203ENST00000556527 NFIXQ14938 502 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 MTHFSDQ2M296 383 aaKnown RBP13.21□□□□□ -0.29
CRX-203ENST00000556527 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.29
CRX-203ENST00000556527 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 ZNF330Q9Y3S2 320 aaPredicted RBP13.21□□□□□ -0.29
CRX-203ENST00000556527 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
CRX-203ENST00000556527 ARFGEF1Q9Y6D6 1849 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 U2SURPO15042 1029 aaKnown RBP13.2□□□□□ -0.3
CRX-203ENST00000556527 LMNB1P20700 586 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
CRX-203ENST00000556527 BRCA1P38398 1863 aaKnown RBP13.2□□□□□ -0.3
CRX-203ENST00000556527 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
CRX-203ENST00000556527 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
CRX-203ENST00000556527 MRC1P22897 1456 aa13.19□□□□□ -0.3
CRX-203ENST00000556527 RASSF7Q02833 373 aa13.19□□□□□ -0.3
CRX-203ENST00000556527 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
CRX-203ENST00000556527 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
CRX-203ENST00000556527 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
CRX-203ENST00000556527 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
CRX-203ENST00000556527 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
CRX-203ENST00000556527 PDE6BP35913 854 aa13.17□□□□□ -0.3
CRX-203ENST00000556527 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
CRX-203ENST00000556527 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
CRX-203ENST00000556527 HTRA3P83110 453 aa13.16□□□□□ -0.3
CRX-203ENST00000556527 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
CRX-203ENST00000556527 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
CRX-203ENST00000556527 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.3
CRX-203ENST00000556527 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 BCL2L12Q9HB09 334 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
CRX-203ENST00000556527 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.31
CRX-203ENST00000556527 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
CRX-203ENST00000556527 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
CRX-203ENST00000556527 SETDB2Q96T68 719 aa13.14□□□□□ -0.31
CRX-203ENST00000556527 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
CRX-203ENST00000556527 TBC1D2BQ9UPU7 963 aa13.14□□□□□ -0.31
CRX-203ENST00000556527 CARMIL3Q8ND23 1372 aa13.14□□□□□ -0.31
CRX-203ENST00000556527 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
CRX-203ENST00000556527 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
CRX-203ENST00000556527 ST5P78524 1137 aa13.13□□□□□ -0.31
CRX-203ENST00000556527 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
CRX-203ENST00000556527 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
CRX-203ENST00000556527 BRIP1Q9BX63 1249 aa13.13□□□□□ -0.31
CRX-203ENST00000556527 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
CRX-203ENST00000556527 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
CRX-203ENST00000556527 C21orf2O43822 256 aa13.12□□□□□ -0.31
CRX-203ENST00000556527 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
CRX-203ENST00000556527 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
CRX-203ENST00000556527 NUDCQ9Y266 331 aa13.12□□□□□ -0.31
CRX-203ENST00000556527 NFKBIEO00221 500 aa13.11□□□□□ -0.31
CRX-203ENST00000556527 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
CRX-203ENST00000556527 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
CRX-203ENST00000556527 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
CRX-203ENST00000556527 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 SOGA3Q5TF21 947 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 PRR5LQ6MZQ0 368 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
CRX-203ENST00000556527 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
CRX-203ENST00000556527 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
CRX-203ENST00000556527 NPC1L1Q9UHC9 1359 aa13.09□□□□□ -0.31
CRX-203ENST00000556527 A1BGP04217 495 aa13.09□□□□□ -0.31
CRX-203ENST00000556527 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
CRX-203ENST00000556527 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
CRX-203ENST00000556527 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
CRX-203ENST00000556527 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
CRX-203ENST00000556527 SBF1O95248 1867 aa13.08□□□□□ -0.32
CRX-203ENST00000556527 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
CRX-203ENST00000556527 STYK1Q6J9G0 422 aa13.08□□□□□ -0.32
CRX-203ENST00000556527 NEFMP07197 916 aa13.07□□□□□ -0.32
CRX-203ENST00000556527 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
CRX-203ENST00000556527 PRELPP51888 382 aa13.07□□□□□ -0.32
CRX-203ENST00000556527 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
CRX-203ENST00000556527 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
CRX-203ENST00000556527 PRPF40BQ6NWY9 871 aaKnown RBP13.07□□□□□ -0.32
CRX-203ENST00000556527 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
CRX-203ENST00000556527 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
CRX-203ENST00000556527 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
CRX-203ENST00000556527 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
CRX-203ENST00000556527 CAPN15O75808 1086 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms