RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CANXP27824 592 aaKnown RBP30.26■■■□□ 2.43
ACTN1-220ENST00000556433 GPBP1L1Q9HC44 474 aaPredicted RBP30.26■■■□□ 2.43
ACTN1-220ENST00000556433 POLRMTO00411 1230 aaKnown RBP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 FCHSD2O94868 740 aa30.25■■■□□ 2.43
ACTN1-220ENST00000556433 U2AF1L5P0DN76 240 aaPredicted RBP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 U2AF1Q01081 240 aaKnown RBP eCLIP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 ZNF790Q6PG37 636 aa30.25■■■□□ 2.43
ACTN1-220ENST00000556433 ZNF526Q8TF50 670 aaPredicted RBP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 ZNF496Q96IT1 587 aaPredicted RBP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 N4BP2Q86UW6 1770 aaPredicted RBP30.25■■■□□ 2.43
ACTN1-220ENST00000556433 ADCY9O60503 1353 aa30.25■■■□□ 2.43
ACTN1-220ENST00000556433 KCNA3P22001 575 aa30.24■■■□□ 2.43
ACTN1-220ENST00000556433 ARHGAP27Q6ZUM4 889 aa30.23■■■□□ 2.43
ACTN1-220ENST00000556433 COL15A1P39059 1388 aa30.23■■■□□ 2.43
ACTN1-220ENST00000556433 KIAA1551Q9HCM1 1747 aa30.22■■■□□ 2.43
ACTN1-220ENST00000556433 TEX13AQ9BXU3 409 aaPredicted RBP30.22■■■□□ 2.43
ACTN1-220ENST00000556433 PIM2Q9P1W9 311 aa30.22■■■□□ 2.43
ACTN1-220ENST00000556433 NFIXQ14938 502 aa30.2■■■□□ 2.43
ACTN1-220ENST00000556433 CEMIPQ8WUJ3 1361 aa30.19■■■□□ 2.42
ACTN1-220ENST00000556433 HEG1Q9ULI3 1381 aa30.19■■■□□ 2.42
ACTN1-220ENST00000556433 BCL2L12Q9HB09 334 aa30.19■■■□□ 2.42
ACTN1-220ENST00000556433 BTBD11A6QL63 1104 aa30.18■■■□□ 2.42
ACTN1-220ENST00000556433 EIF5P55010 431 aaKnown RBP30.18■■■□□ 2.42
ACTN1-220ENST00000556433 FMNL2Q96PY5 1086 aa30.18■■■□□ 2.42
ACTN1-220ENST00000556433 A0A087WZG4 1122 aa30.17■■■□□ 2.42
ACTN1-220ENST00000556433 CHRNA5P30532 468 aa30.17■■■□□ 2.42
ACTN1-220ENST00000556433 DALRD3Q5D0E6 543 aaKnown RBP30.17■■■□□ 2.42
ACTN1-220ENST00000556433 UBR2Q8IWV8 1755 aa30.16■■■□□ 2.42
ACTN1-220ENST00000556433 KCNQ3O43525 872 aa30.16■■■□□ 2.42
ACTN1-220ENST00000556433 RTF1Q92541 710 aaKnown RBP30.16■■■□□ 2.42
ACTN1-220ENST00000556433 SERPINB2P05120 415 aa30.14■■■□□ 2.42
ACTN1-220ENST00000556433 ZNF330Q9Y3S2 320 aaPredicted RBP30.14■■■□□ 2.42
ACTN1-220ENST00000556433 MCM10Q7L590 875 aa30.13■■■□□ 2.41
ACTN1-220ENST00000556433 BICDL1Q6ZP65 573 aa30.12■■■□□ 2.41
ACTN1-220ENST00000556433 A1BGP04217 495 aa30.11■■■□□ 2.41
ACTN1-220ENST00000556433 TBC1D2BQ9UPU7 963 aa30.11■■■□□ 2.41
ACTN1-220ENST00000556433 IL6STP40189 918 aaPredicted RBP30.1■■■□□ 2.41
ACTN1-220ENST00000556433 SIPA1L3O60292 1781 aaPredicted RBP30.1■■■□□ 2.41
ACTN1-220ENST00000556433 NPM2Q86SE8 214 aaKnown RBP30.09■■■□□ 2.41
ACTN1-220ENST00000556433 BRCA1P38398 1863 aaKnown RBP30.08■■■□□ 2.41
ACTN1-220ENST00000556433 HTATSF1O43719 755 aaKnown RBP30.08■■■□□ 2.41
ACTN1-220ENST00000556433 DCTN1Q14203 1278 aa30.08■■■□□ 2.41
ACTN1-220ENST00000556433 USP16Q9Y5T5 823 aa30.07■■■□□ 2.4
ACTN1-220ENST00000556433 C9orf131Q5VYM1 1079 aa30.06■■■□□ 2.4
ACTN1-220ENST00000556433 TBC1D9BQ66K14 1250 aa30.06■■■□□ 2.4
ACTN1-220ENST00000556433 KIF3CO14782 793 aa30.05■■■□□ 2.4
ACTN1-220ENST00000556433 NEFMP07197 916 aa30.04■■■□□ 2.4
ACTN1-220ENST00000556433 SNRPA1P09661 255 aaKnown RBP30.03■■■□□ 2.4
ACTN1-220ENST00000556433 C2CD5Q86YS7 1000 aa30.03■■■□□ 2.4
ACTN1-220ENST00000556433 AFDNP55196 1824 aaKnown RBP30.03■■■□□ 2.4
ACTN1-220ENST00000556433 ARFGEF1Q9Y6D6 1849 aa30.02■■■□□ 2.4
ACTN1-220ENST00000556433 PRAMEF22A3QJZ6 481 aa30.02■■■□□ 2.4
ACTN1-220ENST00000556433 H0YIN7 160 aa30.01■■■□□ 2.39
ACTN1-220ENST00000556433 TAF7Q15545 349 aaPredicted RBP30.01■■■□□ 2.39
ACTN1-220ENST00000556433 CAMTA2O94983 1202 aa30■■■□□ 2.39
ACTN1-220ENST00000556433 PIP4K2AP48426 406 aaPredicted RBP30■■■□□ 2.39
ACTN1-220ENST00000556433 NRXN2Q9P2S2 1712 aa29.99■■■□□ 2.39
ACTN1-220ENST00000556433 DZIP3Q86Y13 1208 aaKnown RBP29.99■■■□□ 2.39
ACTN1-220ENST00000556433 TTLL6Q8N841 843 aa29.99■■■□□ 2.39
ACTN1-220ENST00000556433 SETDB2Q96T68 719 aa29.99■■■□□ 2.39
ACTN1-220ENST00000556433 RNF181Q9P0P0 153 aa29.99■■■□□ 2.39
ACTN1-220ENST00000556433 CARMIL3Q8ND23 1372 aa29.99■■■□□ 2.39
ACTN1-220ENST00000556433 PRR5LQ6MZQ0 368 aa29.97■■■□□ 2.39
ACTN1-220ENST00000556433 CCDC24Q8N4L8 307 aa29.97■■■□□ 2.39
ACTN1-220ENST00000556433 BRIP1Q9BX63 1249 aa29.97■■■□□ 2.39
ACTN1-220ENST00000556433 MIS18AQ9NYP9 233 aa29.97■■■□□ 2.39
ACTN1-220ENST00000556433 PLEKHF1Q96S99 279 aa29.96■■■□□ 2.39
ACTN1-220ENST00000556433 NMRK2Q9NPI5 230 aa29.96■■■□□ 2.39
ACTN1-220ENST00000556433 HSPA6P17066 643 aa29.95■■■□□ 2.39
ACTN1-220ENST00000556433 PDE6BP35913 854 aa29.95■■■□□ 2.39
ACTN1-220ENST00000556433 ZNF622Q969S3 477 aaKnown RBP eCLIP29.94■■■□□ 2.38
ACTN1-220ENST00000556433 PNNQ9H307 717 aaKnown RBP29.94■■■□□ 2.38
ACTN1-220ENST00000556433 PDZRN3Q9UPQ7 1066 aa29.94■■■□□ 2.38
ACTN1-220ENST00000556433 NPHP1O15259 732 aa29.93■■■□□ 2.38
ACTN1-220ENST00000556433 RASSF7Q02833 373 aa29.92■■■□□ 2.38
ACTN1-220ENST00000556433 NFE2L2Q16236 605 aa29.92■■■□□ 2.38
ACTN1-220ENST00000556433 PNISRQ8TF01 805 aaKnown RBP29.92■■■□□ 2.38
ACTN1-220ENST00000556433 NBPF26B4DH59 902 aa29.91■■■□□ 2.38
ACTN1-220ENST00000556433 TOMM70O94826 608 aa29.91■■■□□ 2.38
ACTN1-220ENST00000556433 NBPF10Q6P3W6 841 aaKnown RBP29.91■■■□□ 2.38
ACTN1-220ENST00000556433 CLEC4GQ6UXB4 293 aa29.91■■■□□ 2.38
ACTN1-220ENST00000556433 NBPF15Q8N660 670 aa29.91■■■□□ 2.38
ACTN1-220ENST00000556433 CNBD1Q8NA66 436 aa29.91■■■□□ 2.38
ACTN1-220ENST00000556433 SCN7AQ01118 1682 aa29.9■■■□□ 2.38
ACTN1-220ENST00000556433 RALBP1Q15311 655 aa29.89■■■□□ 2.38
ACTN1-220ENST00000556433 ZNF652Q9Y2D9 606 aa29.89■■■□□ 2.38
ACTN1-220ENST00000556433 KDM2BQ8NHM5 1336 aa29.89■■■□□ 2.38
ACTN1-220ENST00000556433 MAPK8IP3Q9UPT6 1336 aa29.89■■■□□ 2.38
ACTN1-220ENST00000556433 ST5P78524 1137 aa29.88■■■□□ 2.37
ACTN1-220ENST00000556433 THUMPD2Q9BTF0 503 aaKnown RBP29.88■■■□□ 2.37
ACTN1-220ENST00000556433 LMNB1P20700 586 aa29.87■■■□□ 2.37
ACTN1-220ENST00000556433 DDX10Q13206 875 aaKnown RBP29.86■■■□□ 2.37
ACTN1-220ENST00000556433 ZNF219Q9P2Y4 722 aaPredicted RBP29.86■■■□□ 2.37
ACTN1-220ENST00000556433 PRELPP51888 382 aa29.85■■■□□ 2.37
ACTN1-220ENST00000556433 NBPF5PQ86XG9 351 aaPredicted RBP29.85■■■□□ 2.37
ACTN1-220ENST00000556433 C16orf71Q8IYS4 520 aaPredicted RBP29.85■■■□□ 2.37
ACTN1-220ENST00000556433 DLEC1Q9Y238 1755 aa29.85■■■□□ 2.37
ACTN1-220ENST00000556433 C21orf2O43822 256 aa29.84■■■□□ 2.37
ACTN1-220ENST00000556433 RRAGCQ9HB90 399 aa29.84■■■□□ 2.37
ACTN1-220ENST00000556433 SBF1O95248 1867 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms