RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
CDKN3-210ENST00000556305 STAG2Q8N3U4 1231 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 MEIOBQ8N635 442 aa7.39□□□□□ -1.23
CDKN3-210ENST00000556305 KLF16Q9BXK1 252 aaPredicted RBP7.39□□□□□ -1.23
CDKN3-210ENST00000556305 BIN2Q9UBW5 565 aaPredicted RBP7.39□□□□□ -1.23
CDKN3-210ENST00000556305 GPC1P35052 558 aa7.38□□□□□ -1.23
CDKN3-210ENST00000556305 GMPRP36959 345 aa7.38□□□□□ -1.23
CDKN3-210ENST00000556305 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
CDKN3-210ENST00000556305 ZSCAN10Q96SZ4 725 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-210ENST00000556305 CAPN5O15484 640 aaPredicted RBP7.37□□□□□ -1.23
CDKN3-210ENST00000556305 FOXK2Q01167 660 aa7.37□□□□□ -1.23
CDKN3-210ENST00000556305 GNASQ5JWF2 1037 aa7.37□□□□□ -1.23
CDKN3-210ENST00000556305 SLC27A3Q5K4L6 730 aa7.37□□□□□ -1.23
CDKN3-210ENST00000556305 TMEM214Q6NUQ4 689 aaKnown RBP7.37□□□□□ -1.23
CDKN3-210ENST00000556305 SLC16A10Q8TF71 515 aa7.37□□□□□ -1.23
CDKN3-210ENST00000556305 GTF3C2Q8WUA4 911 aaPredicted RBP7.37□□□□□ -1.23
CDKN3-210ENST00000556305 AGBL1Q96MI9 1066 aa7.37□□□□□ -1.23
CDKN3-210ENST00000556305 H3BRB1 525 aa7.36□□□□□ -1.23
CDKN3-210ENST00000556305 CENPCQ03188 943 aa7.36□□□□□ -1.23
CDKN3-210ENST00000556305 NPAS3Q8IXF0 933 aa7.36□□□□□ -1.23
CDKN3-210ENST00000556305 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
CDKN3-210ENST00000556305 TUT1Q9H6E5 874 aaKnown RBP7.36□□□□□ -1.23
CDKN3-210ENST00000556305 CABP1Q9NZU7 370 aa7.36□□□□□ -1.23
CDKN3-210ENST00000556305 NXF1Q9UBU9 619 aaKnown RBP7.36□□□□□ -1.23
CDKN3-210ENST00000556305 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
CDKN3-210ENST00000556305 SERTM1A2A2V5 107 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 C21orf2O43822 256 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 ICMTO60725 284 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 ERCC3P19447 782 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 FKBP4Q02790 459 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDKN3-210ENST00000556305 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 HELQQ8TDG4 1101 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 RHBDD1Q8TEB9 315 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 HPS1Q92902 700 aa7.35□□□□□ -1.23
CDKN3-210ENST00000556305 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
CDKN3-210ENST00000556305 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
CDKN3-210ENST00000556305 FAM13AO94988 1023 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 RANGAP1P46060 587 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-210ENST00000556305 ZNF211Q13398 564 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-210ENST00000556305 TEAD4Q15561 434 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 TBCELQ5QJ74 424 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 PPARGC1BQ86YN6 1023 aaKnown RBP7.34□□□□□ -1.23
CDKN3-210ENST00000556305 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 IRF7Q92985 503 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 POLMQ9NP87 494 aaPredicted RBP7.34□□□□□ -1.23
CDKN3-210ENST00000556305 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 HRH3Q9Y5N1 445 aa7.34□□□□□ -1.23
CDKN3-210ENST00000556305 BMP2P12643 396 aa7.33□□□□□ -1.24
CDKN3-210ENST00000556305 SCNN1AP37088 669 aa7.33□□□□□ -1.24
CDKN3-210ENST00000556305 HIRAP54198 1017 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-210ENST00000556305 SCARF1Q14162 830 aa7.33□□□□□ -1.24
CDKN3-210ENST00000556305 NAA30Q147X3 362 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-210ENST00000556305 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-210ENST00000556305 FHDC1Q9C0D6 1143 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-210ENST00000556305 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
CDKN3-210ENST00000556305 SPINT1O43278 529 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 NOS2P35228 1153 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 RNF144AP50876 292 aaPredicted RBP7.32□□□□□ -1.24
CDKN3-210ENST00000556305 MARSP56192 900 aaKnown RBP7.32□□□□□ -1.24
CDKN3-210ENST00000556305 HIF1AQ16665 826 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 ALKBH2Q6NS38 261 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 ABTB2Q8N961 1025 aa7.32□□□□□ -1.24
CDKN3-210ENST00000556305 PURBQ96QR8 312 aaKnown RBP7.32□□□□□ -1.24
CDKN3-210ENST00000556305 DNMT3AQ9Y6K1 912 aaPredicted RBP7.32□□□□□ -1.24
CDKN3-210ENST00000556305 L3MBTL2Q969R5 705 aa7.31□□□□□ -1.24
CDKN3-210ENST00000556305 INSM2Q96T92 566 aaPredicted RBP7.31□□□□□ -1.24
CDKN3-210ENST00000556305 ANO2Q9NQ90 1003 aa7.31□□□□□ -1.24
CDKN3-210ENST00000556305 H3BM21 787 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 EML1O00423 815 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 RTN1Q16799 776 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 MRPL14Q6P1L8 145 aaKnown RBP7.3□□□□□ -1.24
CDKN3-210ENST00000556305 POTEAQ6S8J7 498 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
CDKN3-210ENST00000556305 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 MYO19Q96H55 970 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
CDKN3-210ENST00000556305 TATP17735 454 aaPredicted RBP7.29□□□□□ -1.24
CDKN3-210ENST00000556305 BRD2P25440 801 aaKnown RBP7.29□□□□□ -1.24
CDKN3-210ENST00000556305 PLA2G4AP47712 749 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 AAMPQ13685 434 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 C6orf118Q5T5N4 469 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 C1orf53Q5VUE5 145 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 ZSCAN29Q8IWY8 852 aaPredicted RBP7.29□□□□□ -1.24
CDKN3-210ENST00000556305 STIM2Q9P246 746 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 USP3Q9Y6I4 520 aa7.29□□□□□ -1.24
CDKN3-210ENST00000556305 ERBB4Q15303 1308 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 SPATA31C2B4DYI2 1134 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 NDUFB5O43674 189 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 MAPK1P28482 360 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 GSK3AP49840 483 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 CAPN12Q6ZSI9 719 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 ALDH16A1Q8IZ83 802 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 BCL11AQ9H165 835 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 ZDHHC3Q9NYG2 299 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 DCTN4Q9UJW0 460 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 AMOTL2Q9Y2J4 779 aa7.28□□□□□ -1.24
CDKN3-210ENST00000556305 GPC6Q9Y625 555 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms