RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 SBF1O95248 1867 aa13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 APLP1P51693 650 aa13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
HNRNPC-224ENST00000556226 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
HNRNPC-224ENST00000556226 COL15A1P39059 1388 aa13.13□□□□□ -0.31
HNRNPC-224ENST00000556226 U2SURPO15042 1029 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-224ENST00000556226 HTRA3P83110 453 aa13.13□□□□□ -0.31
HNRNPC-224ENST00000556226 NFIXQ14938 502 aa13.13□□□□□ -0.31
HNRNPC-224ENST00000556226 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
HNRNPC-224ENST00000556226 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 COL3A1P02461 1466 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 CARMIL3Q8ND23 1372 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 ZPR1O75312 459 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 PRELPP51888 382 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 RASSF7Q02833 373 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 NUDCQ9Y266 331 aa13.12□□□□□ -0.31
HNRNPC-224ENST00000556226 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
HNRNPC-224ENST00000556226 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
HNRNPC-224ENST00000556226 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-224ENST00000556226 PCNTO95613 3336 aa13.11□□□□□ -0.31
HNRNPC-224ENST00000556226 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
HNRNPC-224ENST00000556226 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
HNRNPC-224ENST00000556226 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
HNRNPC-224ENST00000556226 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 SERPINB2P05120 415 aa13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
HNRNPC-224ENST00000556226 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 FSTL1Q12841 308 aa13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-224ENST00000556226 NFKBIEO00221 500 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.326e-11■■□□□ 14.2
HNRNPC-224ENST00000556226 TEFQ10587 303 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
HNRNPC-224ENST00000556226 LMNB1P20700 586 aa13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
HNRNPC-224ENST00000556226 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
HNRNPC-224ENST00000556226 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HNRNPC-224ENST00000556226 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
HNRNPC-224ENST00000556226 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
HNRNPC-224ENST00000556226 TEX13AQ9BXU3 409 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-224ENST00000556226 STARD3NLO95772 234 aa13.03□□□□□ -0.32
HNRNPC-224ENST00000556226 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
HNRNPC-224ENST00000556226 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 H0YIN7 160 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 KCNQ3O43525 872 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.33
HNRNPC-224ENST00000556226 POTECB2RU33 542 aa13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 A1BGP04217 495 aa13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 NEFMP07197 916 aa13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 RALBP1Q15311 655 aa13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
HNRNPC-224ENST00000556226 A0A087WZG4 1122 aa13□□□□□ -0.33
HNRNPC-224ENST00000556226 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HNRNPC-224ENST00000556226 C21orf2O43822 256 aa13□□□□□ -0.33
HNRNPC-224ENST00000556226 CAMTA2O94983 1202 aa13□□□□□ -0.33
HNRNPC-224ENST00000556226 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
HNRNPC-224ENST00000556226 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
HNRNPC-224ENST00000556226 BRIP1Q9BX63 1249 aa13□□□□□ -0.33
HNRNPC-224ENST00000556226 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
HNRNPC-224ENST00000556226 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
HNRNPC-224ENST00000556226 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-224ENST00000556226 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
HNRNPC-224ENST00000556226 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms