RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
XRCC3-215ENST00000555964 USPL1Q5W0Q7 1092 aa22.91■■□□□ 1.26
XRCC3-215ENST00000555964 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
XRCC3-215ENST00000555964 TM4SF1P30408 202 aa22.9■■□□□ 1.26
XRCC3-215ENST00000555964 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
XRCC3-215ENST00000555964 DLEC1Q9Y238 1755 aa22.89■■□□□ 1.26
XRCC3-215ENST00000555964 NRXN2Q9P2S2 1712 aa22.89■■□□□ 1.26
XRCC3-215ENST00000555964 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
XRCC3-215ENST00000555964 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.25
XRCC3-215ENST00000555964 TNRC6CQ9HCJ0 1690 aaKnown RBP22.89■■□□□ 1.25
XRCC3-215ENST00000555964 MTHFSDQ2M296 383 aaKnown RBP22.88■■□□□ 1.25
XRCC3-215ENST00000555964 RBM46Q8TBY0 533 aaKnown RBP22.88■■□□□ 1.25
XRCC3-215ENST00000555964 NMRK2Q9NPI5 230 aa22.88■■□□□ 1.25
XRCC3-215ENST00000555964 ZC3H4Q9UPT8 1303 aaKnown RBP22.87■■□□□ 1.25
XRCC3-215ENST00000555964 STARD3NLO95772 234 aa22.87■■□□□ 1.25
XRCC3-215ENST00000555964 CHRNA5P30532 468 aa22.87■■□□□ 1.25
XRCC3-215ENST00000555964 RNF181Q9P0P0 153 aa22.87■■□□□ 1.25
XRCC3-215ENST00000555964 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
XRCC3-215ENST00000555964 NPC1L1Q9UHC9 1359 aa22.87■■□□□ 1.25
XRCC3-215ENST00000555964 CC2D1BQ5T0F9 858 aaKnown RBP22.86■■□□□ 1.25
XRCC3-215ENST00000555964 A0A087WZG4 1122 aa22.85■■□□□ 1.25
XRCC3-215ENST00000555964 NFIXQ14938 502 aa22.85■■□□□ 1.25
XRCC3-215ENST00000555964 GAS2L2Q8NHY3 880 aa22.85■■□□□ 1.25
XRCC3-215ENST00000555964 WDR90Q96KV7 1748 aa22.85■■□□□ 1.25
XRCC3-215ENST00000555964 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
XRCC3-215ENST00000555964 TEFQ10587 303 aa22.83■■□□□ 1.25
XRCC3-215ENST00000555964 FSTL1Q12841 308 aa22.83■■□□□ 1.25
XRCC3-215ENST00000555964 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
XRCC3-215ENST00000555964 SIPA1L3O60292 1781 aaPredicted RBP22.82■■□□□ 1.24
XRCC3-215ENST00000555964 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
XRCC3-215ENST00000555964 SERPINB2P05120 415 aa22.81■■□□□ 1.24
XRCC3-215ENST00000555964 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
XRCC3-215ENST00000555964 PDZRN3Q9UPQ7 1066 aa22.81■■□□□ 1.24
XRCC3-215ENST00000555964 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
XRCC3-215ENST00000555964 CCDC88AQ3V6T2 1871 aa22.8■■□□□ 1.24
XRCC3-215ENST00000555964 GNAT3A8MTJ3 354 aa22.8■■□□□ 1.24
XRCC3-215ENST00000555964 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
XRCC3-215ENST00000555964 NPM2Q86SE8 214 aaKnown RBP22.8■■□□□ 1.24
XRCC3-215ENST00000555964 TTLL6Q8N841 843 aa22.8■■□□□ 1.24
XRCC3-215ENST00000555964 H0YIN7 160 aa22.79■■□□□ 1.24
XRCC3-215ENST00000555964 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
XRCC3-215ENST00000555964 LMNB1P20700 586 aa22.78■■□□□ 1.24
XRCC3-215ENST00000555964 EIF5P55010 431 aaKnown RBP22.78■■□□□ 1.24
XRCC3-215ENST00000555964 ZNF790Q6PG37 636 aa22.78■■□□□ 1.24
XRCC3-215ENST00000555964 BCL2L12Q9HB09 334 aa22.78■■□□□ 1.24
XRCC3-215ENST00000555964 C2CD5Q86YS7 1000 aa22.77■■□□□ 1.24
XRCC3-215ENST00000555964 TIAM2Q8IVF5 1701 aa22.77■■□□□ 1.23
XRCC3-215ENST00000555964 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
XRCC3-215ENST00000555964 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
XRCC3-215ENST00000555964 FMNL2Q96PY5 1086 aa22.76■■□□□ 1.23
XRCC3-215ENST00000555964 SMC1BQ8NDV3 1235 aa22.75■■□□□ 1.23
XRCC3-215ENST00000555964 RRAGCQ9HB90 399 aa22.75■■□□□ 1.23
XRCC3-215ENST00000555964 CARMIL3Q8ND23 1372 aa22.75■■□□□ 1.23
XRCC3-215ENST00000555964 PDE6BP35913 854 aa22.74■■□□□ 1.23
XRCC3-215ENST00000555964 IL6STP40189 918 aaPredicted RBP22.74■■□□□ 1.23
XRCC3-215ENST00000555964 RASSF7Q02833 373 aa22.74■■□□□ 1.23
XRCC3-215ENST00000555964 BICDL1Q6ZP65 573 aa22.74■■□□□ 1.23
XRCC3-215ENST00000555964 DNAJC5GQ8N7S2 189 aa22.74■■□□□ 1.23
XRCC3-215ENST00000555964 ANKRD31Q8N7Z5 1873 aa22.74■■□□□ 1.23
XRCC3-215ENST00000555964 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
XRCC3-215ENST00000555964 ZNF330Q9Y3S2 320 aaPredicted RBP22.73■■□□□ 1.23
XRCC3-215ENST00000555964 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
XRCC3-215ENST00000555964 BRIP1Q9BX63 1249 aa22.72■■□□□ 1.23
XRCC3-215ENST00000555964 CEMIPQ8WUJ3 1361 aa22.72■■□□□ 1.23
XRCC3-215ENST00000555964 GLTPD2A6NH11 291 aa22.71■■□□□ 1.23
XRCC3-215ENST00000555964 NPHP1O15259 732 aa22.71■■□□□ 1.23
XRCC3-215ENST00000555964 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
XRCC3-215ENST00000555964 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
XRCC3-215ENST00000555964 VEGFAP15692 232 aaPredicted RBP22.7■■□□□ 1.22
XRCC3-215ENST00000555964 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
XRCC3-215ENST00000555964 TBC1D9BQ66K14 1250 aa22.7■■□□□ 1.22
XRCC3-215ENST00000555964 KLRG1Q96E93 195 aa22.7■■□□□ 1.22
XRCC3-215ENST00000555964 FER1L6Q2WGJ9 1857 aa22.69■■□□□ 1.22
XRCC3-215ENST00000555964 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
XRCC3-215ENST00000555964 ZNF622Q969S3 477 aaKnown RBP eCLIP22.69■■□□□ 1.22
XRCC3-215ENST00000555964 SETDB2Q96T68 719 aa22.69■■□□□ 1.22
XRCC3-215ENST00000555964 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
XRCC3-215ENST00000555964 ST5P78524 1137 aa22.68■■□□□ 1.22
XRCC3-215ENST00000555964 CNBD1Q8NA66 436 aa22.68■■□□□ 1.22
XRCC3-215ENST00000555964 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
XRCC3-215ENST00000555964 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
XRCC3-215ENST00000555964 PRR5LQ6MZQ0 368 aa22.67■■□□□ 1.22
XRCC3-215ENST00000555964 DPY19L2Q6NUT2 758 aa22.67■■□□□ 1.22
XRCC3-215ENST00000555964 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
XRCC3-215ENST00000555964 ARFGEF2Q9Y6D5 1785 aa22.67■■□□□ 1.22
XRCC3-215ENST00000555964 CACNA1SQ13698 1873 aa22.66■■□□□ 1.22
XRCC3-215ENST00000555964 NFKBIEO00221 500 aa22.66■■□□□ 1.22
XRCC3-215ENST00000555964 SOGA3Q5TF21 947 aa22.66■■□□□ 1.22
XRCC3-215ENST00000555964 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
XRCC3-215ENST00000555964 JMYQ8N9B5 988 aa22.65■■□□□ 1.22
XRCC3-215ENST00000555964 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
XRCC3-215ENST00000555964 ZNF652Q9Y2D9 606 aa22.65■■□□□ 1.22
XRCC3-215ENST00000555964 CAMTA2O94983 1202 aa22.64■■□□□ 1.21
XRCC3-215ENST00000555964 A1BGP04217 495 aa22.64■■□□□ 1.21
XRCC3-215ENST00000555964 LTBP3Q9NS15 1303 aa22.63■■□□□ 1.21
XRCC3-215ENST00000555964 STYK1Q6J9G0 422 aa22.63■■□□□ 1.21
XRCC3-215ENST00000555964 DZIP3Q86Y13 1208 aaKnown RBP22.63■■□□□ 1.21
XRCC3-215ENST00000555964 C21orf2O43822 256 aa22.62■■□□□ 1.21
XRCC3-215ENST00000555964 PRELPP51888 382 aa22.62■■□□□ 1.21
XRCC3-215ENST00000555964 ERFEQ4G0M1 354 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms