RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
PCNX4-211ENST00000555929 IFT57Q9NWB7 429 aa9.85□□□□□ -0.83
PCNX4-211ENST00000555929 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 CHL1O00533 1208 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 SEC24BO95487 1268 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 ZNF790Q6PG37 636 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
PCNX4-211ENST00000555929 MYH16Q9H6N6 1097 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 MBIPQ9NS73 344 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 ATG3Q9NT62 314 aa9.84□□□□□ -0.83
PCNX4-211ENST00000555929 ZBED9Q6R2W3 1325 aa9.83□□□□□ -0.84
PCNX4-211ENST00000555929 BCL9O00512 1426 aa9.83□□□□□ -0.84
PCNX4-211ENST00000555929 E9PSI1 815 aa9.83□□□□□ -0.84
PCNX4-211ENST00000555929 ELL2O00472 640 aaPredicted RBP9.83□□□□□ -0.84
PCNX4-211ENST00000555929 KCNQ4P56696 695 aa9.83□□□□□ -0.84
PCNX4-211ENST00000555929 BRWD3Q6RI45 1802 aa9.83□□□□□ -0.84
PCNX4-211ENST00000555929 IL16Q14005 1332 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 SHANK3Q9BYB0 1731 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 ZNF853P0CG23 659 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 BAG6P46379 1132 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
PCNX4-211ENST00000555929 SLFN5Q08AF3 891 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
PCNX4-211ENST00000555929 FMNL2Q96PY5 1086 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 PALLDQ8WX93 1383 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 FANCIQ9NVI1 1328 aa9.82□□□□□ -0.84
PCNX4-211ENST00000555929 EIF2S2P20042 333 aaKnown RBP9.81□□□□□ -0.84
PCNX4-211ENST00000555929 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
PCNX4-211ENST00000555929 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
PCNX4-211ENST00000555929 KRT24Q2M2I5 525 aa9.81□□□□□ -0.84
PCNX4-211ENST00000555929 DEFB132Q7Z7B7 95 aa9.81□□□□□ -0.84
PCNX4-211ENST00000555929 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
PCNX4-211ENST00000555929 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.84
PCNX4-211ENST00000555929 BABAM1Q9NWV8 329 aa9.81□□□□□ -0.84
PCNX4-211ENST00000555929 CCNL1Q9UK58 526 aaPredicted RBP9.81□□□□□ -0.84
PCNX4-211ENST00000555929 KAT6BQ8WYB5 2073 aa9.81□□□□□ -0.84
PCNX4-211ENST00000555929 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 SIK1P57059 783 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 EZH2Q15910 746 aaKnown RBP9.8□□□□□ -0.84
PCNX4-211ENST00000555929 IER5LQ5T953 404 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 C8orf58Q8NAV2 365 aa9.8□□□□□ -0.84
PCNX4-211ENST00000555929 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 SNRPA1P09661 255 aaKnown RBP9.79□□□□□ -0.84
PCNX4-211ENST00000555929 TXNRD1Q16881 649 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 DNAJC10Q8IXB1 793 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
PCNX4-211ENST00000555929 DLG5Q8TDM6 1919 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 TCERG1O14776 1098 aaKnown RBP9.78□□□□□ -0.84
PCNX4-211ENST00000555929 PLSCR1O15162 318 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
PCNX4-211ENST00000555929 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 TSPYL6Q8N831 410 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
PCNX4-211ENST00000555929 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 TOGARAM1Q9Y4F4 1720 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 MRC1P22897 1456 aa9.78□□□□□ -0.84
PCNX4-211ENST00000555929 EP400Q96L91 3159 aa9.77□□□□□ -0.84
PCNX4-211ENST00000555929 HEG1Q9ULI3 1381 aa9.77□□□□□ -0.84
PCNX4-211ENST00000555929 STARD3NLO95772 234 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-211ENST00000555929 ITPK1Q13572 414 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-211ENST00000555929 HDGFL1Q5TGJ6 251 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 ARXQ96QS3 562 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 CAMKK2Q96RR4 588 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
PCNX4-211ENST00000555929 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 SCN11AQ9UI33 1791 aa9.77□□□□□ -0.85
PCNX4-211ENST00000555929 A1BGP04217 495 aa9.76□□□□□ -0.85
PCNX4-211ENST00000555929 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
PCNX4-211ENST00000555929 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
PCNX4-211ENST00000555929 NPM2Q86SE8 214 aaKnown RBP9.76□□□□□ -0.85
PCNX4-211ENST00000555929 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
PCNX4-211ENST00000555929 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
PCNX4-211ENST00000555929 NHSQ6T4R5 1651 aa9.76□□□□□ -0.85
PCNX4-211ENST00000555929 ADAMTS7Q9UKP4 1686 aa9.75□□□□□ -0.85
PCNX4-211ENST00000555929 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
PCNX4-211ENST00000555929 VAMP4O75379 141 aa9.75□□□□□ -0.85
PCNX4-211ENST00000555929 MYL6BP14649 208 aa9.75□□□□□ -0.85
PCNX4-211ENST00000555929 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
PCNX4-211ENST00000555929 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
PCNX4-211ENST00000555929 AK7Q96M32 723 aa9.75□□□□□ -0.85
PCNX4-211ENST00000555929 POTEMA6NI47 508 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 PHF14O94880 888 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 ANXA1P04083 346 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 PYGBP11216 843 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
PCNX4-211ENST00000555929 CCDC30Q5VVM6 783 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 STK31Q9BXU1 1019 aa9.74□□□□□ -0.85
PCNX4-211ENST00000555929 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms