RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 BTAF1O14981 1849 aa16■□□□□ 0.15
SHMT2-221ENST00000555773 PAPPAQ13219 1627 aa16■□□□□ 0.15
SHMT2-221ENST00000555773 A1BGP04217 495 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
SHMT2-221ENST00000555773 BRPF1P55201 1214 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-221ENST00000555773 KCNQ4P56696 695 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 INTS5Q6P9B9 1019 aaKnown RBP15.99■□□□□ 0.15
SHMT2-221ENST00000555773 DEFB132Q7Z7B7 95 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 CCDC87Q9NVE4 849 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 HYPKQ9NX55 129 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
SHMT2-221ENST00000555773 CNTNAP4Q9C0A0 1308 aa15.98■□□□□ 0.15
SHMT2-221ENST00000555773 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
SHMT2-221ENST00000555773 PDIA6Q15084 440 aa15.98■□□□□ 0.15
SHMT2-221ENST00000555773 SSH1Q8WYL5 1049 aa15.98■□□□□ 0.15
SHMT2-221ENST00000555773 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-221ENST00000555773 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
SHMT2-221ENST00000555773 CHPF2Q9P2E5 772 aa15.97■□□□□ 0.15
SHMT2-221ENST00000555773 UBR2Q8IWV8 1755 aa15.97■□□□□ 0.15
SHMT2-221ENST00000555773 NBPF26B4DH59 902 aa15.96■□□□□ 0.15
SHMT2-221ENST00000555773 RPS6KA4O75676 772 aa15.96■□□□□ 0.15
SHMT2-221ENST00000555773 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
SHMT2-221ENST00000555773 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.15
SHMT2-221ENST00000555773 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
SHMT2-221ENST00000555773 NBPF15Q8N660 670 aa15.96■□□□□ 0.15
SHMT2-221ENST00000555773 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
SHMT2-221ENST00000555773 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
SHMT2-221ENST00000555773 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
SHMT2-221ENST00000555773 EIF5P55010 431 aaKnown RBP15.95■□□□□ 0.14
SHMT2-221ENST00000555773 AK7Q96M32 723 aa15.95■□□□□ 0.14
SHMT2-221ENST00000555773 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
SHMT2-221ENST00000555773 ZNF831Q5JPB2 1677 aa15.95■□□□□ 0.14
SHMT2-221ENST00000555773 A0A087WZG4 1122 aa15.94■□□□□ 0.14
SHMT2-221ENST00000555773 MYL6BP14649 208 aa15.94■□□□□ 0.14
SHMT2-221ENST00000555773 LRP10Q7Z4F1 713 aa15.94■□□□□ 0.14
SHMT2-221ENST00000555773 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
SHMT2-221ENST00000555773 RTCBQ9Y3I0 505 aaKnown RBP15.94■□□□□ 0.14
SHMT2-221ENST00000555773 IPO8O15397 1037 aaKnown RBP15.93■□□□□ 0.14
SHMT2-221ENST00000555773 BCAR3O75815 825 aa15.93■□□□□ 0.14
SHMT2-221ENST00000555773 ADRA2BP18089 450 aa15.93■□□□□ 0.14
SHMT2-221ENST00000555773 PROSER3Q2NL68 480 aa15.93■□□□□ 0.14
SHMT2-221ENST00000555773 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
SHMT2-221ENST00000555773 LY75O60449 1722 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 GNPATO15228 680 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 STK32BQ9NY57 414 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
SHMT2-221ENST00000555773 CICQ96RK0 1608 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 ANXA1P04083 346 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 SSFA2P28290 1259 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 FLIIQ13045 1269 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 XAGE3Q8WTP9 111 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 PHAXQ9H814 394 aaKnown RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 NOB1Q9ULX3 412 aaKnown RBP15.91■□□□□ 0.14
SHMT2-221ENST00000555773 PTPRCP08575 1304 aa15.91■□□□□ 0.14
SHMT2-221ENST00000555773 RGPD3A6NKT7 1758 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-221ENST00000555773 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
SHMT2-221ENST00000555773 SLC15A2Q16348 729 aa15.9■□□□□ 0.14
SHMT2-221ENST00000555773 G2E3Q7L622 706 aa15.9■□□□□ 0.14
SHMT2-221ENST00000555773 RGL2O15211 777 aa15.89■□□□□ 0.13
SHMT2-221ENST00000555773 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
SHMT2-221ENST00000555773 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
SHMT2-221ENST00000555773 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
SHMT2-221ENST00000555773 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
SHMT2-221ENST00000555773 ZNF330Q9Y3S2 320 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-221ENST00000555773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.88■□□□□ 0.13
SHMT2-221ENST00000555773 ERVV-1B6SEH8 477 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 FKBP5Q13451 457 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-221ENST00000555773 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 ZKSCAN2Q63HK3 967 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
SHMT2-221ENST00000555773 PLBD2Q8NHP8 589 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-221ENST00000555773 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
SHMT2-221ENST00000555773 C5P01031 1676 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 TJP1Q07157 1748 aa15.88■□□□□ 0.13
SHMT2-221ENST00000555773 MS4A1P11836 297 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 RFC4P35249 363 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 ARXQ96QS3 562 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 NARFQ9UHQ1 456 aa15.87■□□□□ 0.13
SHMT2-221ENST00000555773 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
SHMT2-221ENST00000555773 ZPR1O75312 459 aa15.86■□□□□ 0.13
SHMT2-221ENST00000555773 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
SHMT2-221ENST00000555773 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
SHMT2-221ENST00000555773 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
SHMT2-221ENST00000555773 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-221ENST00000555773 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms