RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 STK3Q13188 491 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 CCDC183Q5T5S1 534 aa21.33■■□□□ 1.01
RCCD1-204ENST00000555737 CKAP2LQ8IYA6 745 aa21.33■■□□□ 1.01
RCCD1-204ENST00000555737 DIAPH3Q9NSV4 1193 aa21.33■■□□□ 1.01
RCCD1-204ENST00000555737 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
RCCD1-204ENST00000555737 CDK12Q9NYV4 1490 aaPredicted RBP21.33■■□□□ 1.01
RCCD1-204ENST00000555737 ZSCAN22P10073 491 aaPredicted RBP21.33■■□□□ 1
RCCD1-204ENST00000555737 TAOK2Q9UL54 1235 aa21.33■■□□□ 1
RCCD1-204ENST00000555737 GJB2P29033 226 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 NLRP6P59044 892 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 PPFIA3O75145 1194 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 RUFY3Q7L099 469 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 ADCK5Q3MIX3 580 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 RHPN1Q8TCX5 695 aa21.32■■□□□ 1
RCCD1-204ENST00000555737 TFIP11Q9UBB9 837 aaKnown RBP21.32■■□□□ 1
RCCD1-204ENST00000555737 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
RCCD1-204ENST00000555737 TAF7Q15545 349 aaPredicted RBP21.31■■□□□ 1
RCCD1-204ENST00000555737 PA2G4Q9UQ80 394 aaKnown RBP21.31■■□□□ 1
RCCD1-204ENST00000555737 INTS4Q96HW7 963 aaKnown RBP21.3■■□□□ 1
RCCD1-204ENST00000555737 ATP7BP35670 1465 aa21.3■■□□□ 1
RCCD1-204ENST00000555737 SOS1Q07889 1333 aaPredicted RBP21.3■■□□□ 1
RCCD1-204ENST00000555737 CPSF1Q10570 1443 aaKnown RBP21.3■■□□□ 1
RCCD1-204ENST00000555737 MCM5P33992 734 aa21.3■■□□□ 1
RCCD1-204ENST00000555737 HSPA4P34932 840 aa21.3■■□□□ 1
RCCD1-204ENST00000555737 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
RCCD1-204ENST00000555737 PTH1RQ03431 593 aa21.29■■□□□ 1
RCCD1-204ENST00000555737 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
RCCD1-204ENST00000555737 FBXW7Q969H0 707 aa21.29■■□□□ 1
RCCD1-204ENST00000555737 LIMCH1Q9UPQ0 1083 aa21.29■■□□□ 1
RCCD1-204ENST00000555737 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
RCCD1-204ENST00000555737 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 COL9A3Q14050 684 aaPredicted RBP21.28■■□□□ 1
RCCD1-204ENST00000555737 PYCARDQ9ULZ3 195 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 KIAA0232Q92628 1395 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 AP5Z1O43299 807 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 F13A1P00488 732 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 PI4KAP2A4QPH2 592 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 ANAPC15P60006 121 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 CEBPZQ03701 1054 aaKnown RBP21.28■■□□□ 1
RCCD1-204ENST00000555737 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 CNTROBQ8N137 903 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 PI4KAP1Q8N8J0 262 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 MAP7D2Q96T17 732 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 SIL1Q9H173 461 aa21.28■■□□□ 1
RCCD1-204ENST00000555737 GOLGA6L4A6NEF3 574 aa21.27■■□□□ 1
RCCD1-204ENST00000555737 GNAT3A8MTJ3 354 aa21.27■■□□□ 1
RCCD1-204ENST00000555737 PDRG1Q9NUG6 133 aa21.27■■□□□ 1
RCCD1-204ENST00000555737 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
RCCD1-204ENST00000555737 SALL3Q9BXA9 1300 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 SGSM2O43147 1006 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 UBE2HP62256 183 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 LUZP1Q86V48 1076 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.26■□□□□ 0.99
RCCD1-204ENST00000555737 KCNQ3O43525 872 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
RCCD1-204ENST00000555737 CRB1P82279 1406 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 KDM4AO75164 1064 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 TERF1P54274 439 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 AIMP1Q12904 312 aaKnown RBP21.25■□□□□ 0.99
RCCD1-204ENST00000555737 ZNF592Q92610 1267 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 CHPF2Q9P2E5 772 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 TMEM131LA2VDJ0 1609 aa21.25■□□□□ 0.99
RCCD1-204ENST00000555737 MYRIPQ8NFW9 859 aa21.24■□□□□ 0.99
RCCD1-204ENST00000555737 LARP1BQ659C4 914 aaKnown RBP21.24■□□□□ 0.99
RCCD1-204ENST00000555737 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
RCCD1-204ENST00000555737 KIF3AQ9Y496 699 aa21.24■□□□□ 0.99
RCCD1-204ENST00000555737 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
RCCD1-204ENST00000555737 PTGS1P23219 599 aa21.24■□□□□ 0.99
RCCD1-204ENST00000555737 ARHGAP31Q2M1Z3 1444 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 ANKRD26Q9UPS8 1709 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 TCHHQ07283 1943 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 ZNF710Q8N1W2 664 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 PI4K2BQ8TCG2 481 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
RCCD1-204ENST00000555737 RAD50Q92878 1312 aa21.23■□□□□ 0.99
RCCD1-204ENST00000555737 CDC42BPGQ6DT37 1551 aa21.22■□□□□ 0.99
RCCD1-204ENST00000555737 LRMPQ12912 555 aa21.22■□□□□ 0.99
RCCD1-204ENST00000555737 C16orf45Q96MC5 204 aaPredicted RBP21.22■□□□□ 0.99
RCCD1-204ENST00000555737 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
RCCD1-204ENST00000555737 ROBO2Q9HCK4 1378 aa21.22■□□□□ 0.99
RCCD1-204ENST00000555737 IFIT2P09913 472 aaKnown RBP21.22■□□□□ 0.99
RCCD1-204ENST00000555737 FAM184AQ8NB25 1140 aa21.22■□□□□ 0.99
RCCD1-204ENST00000555737 NAP1L2Q9ULW6 460 aaPredicted RBP21.22■□□□□ 0.99
RCCD1-204ENST00000555737 CHAF1AQ13111 956 aaPredicted RBP21.22■□□□□ 0.99
RCCD1-204ENST00000555737 FAM227BQ96M60 508 aa21.22■□□□□ 0.99
RCCD1-204ENST00000555737 KIF1BPQ96EK5 621 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 DDX11Q96FC9 970 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 LGR6Q9HBX8 967 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 LIG1P18858 919 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 CEBPAP49715 358 aaPredicted RBP21.21■□□□□ 0.99
RCCD1-204ENST00000555737 STAP2Q9UGK3 403 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
RCCD1-204ENST00000555737 RAB11FIP3O75154 756 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 ME3Q16798 604 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 BCL2L12Q9HB09 334 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 NRBP1Q9UHY1 535 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 CYP46A1Q9Y6A2 500 aa21.2■□□□□ 0.98
RCCD1-204ENST00000555737 A0A087WWV3 80 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms