RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 GPT2Q8TD30 523 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 UBE2Q2Q8WVN8 375 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 NAP1L5Q96NT1 182 aaPredicted RBP19.62■□□□□ 0.73
TUBB3-209ENST00000555609 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 USP42Q9H9J4 1324 aaKnown RBP19.62■□□□□ 0.73
TUBB3-209ENST00000555609 SYAP1Q96A49 352 aaPredicted RBP19.61■□□□□ 0.73
TUBB3-209ENST00000555609 PDLIM2Q96JY6 352 aa19.61■□□□□ 0.73
TUBB3-209ENST00000555609 AK9Q5TCS8 1911 aa19.61■□□□□ 0.73
TUBB3-209ENST00000555609 RHPN1Q8TCX5 695 aa19.6■□□□□ 0.73
TUBB3-209ENST00000555609 EIF4A1P60842 406 aaKnown RBP19.6■□□□□ 0.73
TUBB3-209ENST00000555609 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
TUBB3-209ENST00000555609 TTC41PQ6P2S7 1318 aa19.59■□□□□ 0.73
TUBB3-209ENST00000555609 WDR33Q9C0J8 1336 aaKnown RBP19.59■□□□□ 0.73
TUBB3-209ENST00000555609 CNTROBQ8N137 903 aa19.59■□□□□ 0.73
TUBB3-209ENST00000555609 PALD1Q9ULE6 856 aa19.59■□□□□ 0.73
TUBB3-209ENST00000555609 SURF6O75683 361 aaKnown RBP19.58■□□□□ 0.73
TUBB3-209ENST00000555609 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.73
TUBB3-209ENST00000555609 KCNH5Q8NCM2 988 aa19.58■□□□□ 0.73
TUBB3-209ENST00000555609 OVOS2A0A0G2JMS6 1433 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
TUBB3-209ENST00000555609 SGSM2O43147 1006 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 PI4K2BQ8TCG2 481 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 DNAAF4Q8WXU2 420 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 NECTIN2Q92692 538 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 RBSNQ9H1K0 784 aa19.58■□□□□ 0.72
TUBB3-209ENST00000555609 RAD50Q92878 1312 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 PHF14O94880 888 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 TPM2P07951 284 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 KCNA6P17658 529 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 MCM5P33992 734 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 PRIM1P49642 420 aaKnown RBP19.57■□□□□ 0.72
TUBB3-209ENST00000555609 MTX1Q13505 466 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 BEND3Q5T5X7 828 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 PHF8Q9UPP1 1060 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 PHRF1Q9P1Y6 1649 aaKnown RBP19.57■□□□□ 0.72
TUBB3-209ENST00000555609 KDM3BQ7LBC6 1761 aa19.57■□□□□ 0.72
TUBB3-209ENST00000555609 MSNP26038 577 aaKnown RBP19.56■□□□□ 0.72
TUBB3-209ENST00000555609 AKAP4Q5JQC9 854 aa19.56■□□□□ 0.72
TUBB3-209ENST00000555609 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
TUBB3-209ENST00000555609 TERF1P54274 439 aa19.56■□□□□ 0.72
TUBB3-209ENST00000555609 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
TUBB3-209ENST00000555609 UNC5CLQ8IV45 518 aa19.56■□□□□ 0.72
TUBB3-209ENST00000555609 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
TUBB3-209ENST00000555609 NFAT5O94916 1531 aa19.55■□□□□ 0.72
TUBB3-209ENST00000555609 SRGAP3O43295 1099 aa19.55■□□□□ 0.72
TUBB3-209ENST00000555609 ALDH1L1O75891 902 aa19.55■□□□□ 0.72
TUBB3-209ENST00000555609 RUFY2Q8WXA3 655 aa19.55■□□□□ 0.72
TUBB3-209ENST00000555609 TMEM63CQ9P1W3 806 aa19.55■□□□□ 0.72
TUBB3-209ENST00000555609 GLRX3O76003 335 aaKnown RBP19.54■□□□□ 0.72
TUBB3-209ENST00000555609 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
TUBB3-209ENST00000555609 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
TUBB3-209ENST00000555609 LTV1Q96GA3 475 aaPredicted RBP19.54■□□□□ 0.72
TUBB3-209ENST00000555609 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
TUBB3-209ENST00000555609 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
TUBB3-209ENST00000555609 KIAA1211Q6ZU35 1233 aa19.54■□□□□ 0.72
TUBB3-209ENST00000555609 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
TUBB3-209ENST00000555609 IL1RAPL2Q9NP60 686 aa19.54■□□□□ 0.72
TUBB3-209ENST00000555609 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
TUBB3-209ENST00000555609 CRYBG1Q9Y4K1 1723 aa19.53■□□□□ 0.72
TUBB3-209ENST00000555609 LTN1O94822 1766 aa19.52■□□□□ 0.72
TUBB3-209ENST00000555609 OFD1O75665 1012 aa19.52■□□□□ 0.72
TUBB3-209ENST00000555609 PDIA4P13667 645 aaKnown RBP19.52■□□□□ 0.72
TUBB3-209ENST00000555609 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.72
TUBB3-209ENST00000555609 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.52■□□□□ 0.72
TUBB3-209ENST00000555609 LSG1Q9H089 658 aaKnown RBP19.52■□□□□ 0.72
TUBB3-209ENST00000555609 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.72
TUBB3-209ENST00000555609 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.52■□□□□ 0.72
TUBB3-209ENST00000555609 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.71
TUBB3-209ENST00000555609 TEFQ10587 303 aa19.52■□□□□ 0.71
TUBB3-209ENST00000555609 GPATCH3Q96I76 525 aa19.52■□□□□ 0.71
TUBB3-209ENST00000555609 TTC14Q96N46 770 aa19.52■□□□□ 0.71
TUBB3-209ENST00000555609 DBF4Q9UBU7 674 aaPredicted RBP19.52■□□□□ 0.71
TUBB3-209ENST00000555609 ZNF335Q9H4Z2 1342 aaPredicted RBP19.51■□□□□ 0.71
TUBB3-209ENST00000555609 LETM1O95202 739 aaPredicted RBP19.51■□□□□ 0.71
TUBB3-209ENST00000555609 CHPF2Q9P2E5 772 aa19.51■□□□□ 0.71
TUBB3-209ENST00000555609 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
TUBB3-209ENST00000555609 SNX14Q9Y5W7 946 aa19.51■□□□□ 0.71
TUBB3-209ENST00000555609 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 EIF2S2P20042 333 aaKnown RBP19.5■□□□□ 0.71
TUBB3-209ENST00000555609 NBPF6Q5VWK0 638 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 NBPF4Q96M43 638 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 TM6SF1Q9BZW5 370 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 TSPY26PQ9H489 355 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 ATP6V1DQ9Y5K8 247 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 SYCE3A1L190 88 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 BTBD11A6QL63 1104 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 NBPF7P0C2Y1 421 aaPredicted RBP19.5■□□□□ 0.71
TUBB3-209ENST00000555609 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 CLASRPQ8N2M8 674 aaKnown RBP19.5■□□□□ 0.71
TUBB3-209ENST00000555609 KCNB2Q92953 911 aa19.5■□□□□ 0.71
TUBB3-209ENST00000555609 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
TUBB3-209ENST00000555609 UPF3BQ9BZI7 483 aaKnown RBP19.49■□□□□ 0.71
TUBB3-209ENST00000555609 RRP9O43818 475 aaKnown RBP19.48■□□□□ 0.71
TUBB3-209ENST00000555609 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 ADCY9O60503 1353 aa19.48■□□□□ 0.71
TUBB3-209ENST00000555609 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms