RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 USPL1Q5W0Q7 1092 aa14.78□□□□□ -0.04
TDP1-212ENST00000555565 MORC1Q86VD1 984 aa14.78□□□□□ -0.04
TDP1-212ENST00000555565 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
TDP1-212ENST00000555565 TJP1Q07157 1748 aa14.78□□□□□ -0.04
TDP1-212ENST00000555565 KIF7Q2M1P5 1343 aa14.77□□□□□ -0.04
TDP1-212ENST00000555565 NFIXQ14938 502 aa14.77□□□□□ -0.05
TDP1-212ENST00000555565 PLEKHO1Q53GL0 409 aaPredicted RBP14.77□□□□□ -0.05
TDP1-212ENST00000555565 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
TDP1-212ENST00000555565 SOS1Q07889 1333 aaPredicted RBP14.76□□□□□ -0.05
TDP1-212ENST00000555565 SLC34A2O95436 690 aa14.76□□□□□ -0.05
TDP1-212ENST00000555565 MTHFSP49914 203 aa14.76□□□□□ -0.05
TDP1-212ENST00000555565 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
TDP1-212ENST00000555565 NRXN2Q9P2S2 1712 aa14.75□□□□□ -0.05
TDP1-212ENST00000555565 AMOTQ4VCS5 1084 aa14.75□□□□□ -0.05
TDP1-212ENST00000555565 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
TDP1-212ENST00000555565 TTLL6Q8N841 843 aa14.75□□□□□ -0.05
TDP1-212ENST00000555565 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
TDP1-212ENST00000555565 FOXN1O15353 648 aa14.74□□□□□ -0.05
TDP1-212ENST00000555565 AEBP1Q8IUX7 1158 aa14.74□□□□□ -0.05
TDP1-212ENST00000555565 DNAJC10Q8IXB1 793 aa14.74□□□□□ -0.05
TDP1-212ENST00000555565 MKRN1Q9UHC7 482 aaKnown RBP14.74□□□□□ -0.05
TDP1-212ENST00000555565 NARFQ9UHQ1 456 aa14.74□□□□□ -0.05
TDP1-212ENST00000555565 AFDNP55196 1824 aaKnown RBP14.73□□□□□ -0.05
TDP1-212ENST00000555565 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 ZPR1O75312 459 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 SERPINB2P05120 415 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
TDP1-212ENST00000555565 CARMIL3Q8ND23 1372 aa14.73□□□□□ -0.05
TDP1-212ENST00000555565 C2CD5Q86YS7 1000 aa14.72□□□□□ -0.05
TDP1-212ENST00000555565 PRDM10Q9NQV6 1147 aa14.72□□□□□ -0.05
TDP1-212ENST00000555565 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
TDP1-212ENST00000555565 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
TDP1-212ENST00000555565 IL13P35225 146 aa14.71□□□□□ -0.05
TDP1-212ENST00000555565 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
TDP1-212ENST00000555565 DPY19L2Q6NUT2 758 aa14.71□□□□□ -0.05
TDP1-212ENST00000555565 CCDC88AQ3V6T2 1871 aa14.71□□□□□ -0.05
TDP1-212ENST00000555565 PASKQ96RG2 1323 aa14.7□□□□□ -0.06
TDP1-212ENST00000555565 SULT6B1Q6IMI4 303 aa14.7□□□□□ -0.06
TDP1-212ENST00000555565 CNTNAP1P78357 1384 aa14.7□□□□□ -0.06
TDP1-212ENST00000555565 H0YIN7 160 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 ERFEQ4G0M1 354 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 C1orf141Q5JVX7 400 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 LGR6Q9HBX8 967 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 COL15A1P39059 1388 aa14.69□□□□□ -0.06
TDP1-212ENST00000555565 DDNO94850 711 aaPredicted RBP14.68□□□□□ -0.06
TDP1-212ENST00000555565 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
TDP1-212ENST00000555565 C21orf2O43822 256 aa14.67□□□□□ -0.06
TDP1-212ENST00000555565 ITGBL1O95965 494 aaPredicted RBP14.67□□□□□ -0.06
TDP1-212ENST00000555565 SLC39A6Q13433 755 aa14.67□□□□□ -0.06
TDP1-212ENST00000555565 VEGFBP49765 207 aa14.66□□□□□ -0.06
TDP1-212ENST00000555565 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
TDP1-212ENST00000555565 WBP1LQ9NX94 342 aa14.66□□□□□ -0.06
TDP1-212ENST00000555565 LTBP3Q9NS15 1303 aa14.66□□□□□ -0.06
TDP1-212ENST00000555565 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
TDP1-212ENST00000555565 SCN11AQ9UI33 1791 aa14.65□□□□□ -0.06
TDP1-212ENST00000555565 DICER1Q9UPY3 1922 aaKnown RBP14.65□□□□□ -0.06
TDP1-212ENST00000555565 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
TDP1-212ENST00000555565 EIF5P55010 431 aaKnown RBP14.65□□□□□ -0.06
TDP1-212ENST00000555565 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
TDP1-212ENST00000555565 BRIP1Q9BX63 1249 aa14.65□□□□□ -0.06
TDP1-212ENST00000555565 ANKRD31Q8N7Z5 1873 aa14.65□□□□□ -0.06
TDP1-212ENST00000555565 TBC1D9BQ66K14 1250 aa14.64□□□□□ -0.07
TDP1-212ENST00000555565 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
TDP1-212ENST00000555565 ZNF622Q969S3 477 aaKnown RBP eCLIP14.64□□□□□ -0.07
TDP1-212ENST00000555565 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
TDP1-212ENST00000555565 MRC1P22897 1456 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 NPC1L1Q9UHC9 1359 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
TDP1-212ENST00000555565 HMOX1P09601 288 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 LBX1P52954 281 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 BICDL1Q6ZP65 573 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 CCDC24Q8N4L8 307 aa14.63□□□□□ -0.07
TDP1-212ENST00000555565 L3MBTL3Q96JM7 780 aaPredicted RBP14.63□□□□□ -0.07
TDP1-212ENST00000555565 TAF1DQ9H5J8 278 aaPredicted RBP14.63□□□□□ -0.07
TDP1-212ENST00000555565 CANXP27824 592 aaKnown RBP14.62□□□□□ -0.07
TDP1-212ENST00000555565 LDHDQ86WU2 507 aa14.62□□□□□ -0.07
TDP1-212ENST00000555565 TAOK3Q9H2K8 898 aa14.62□□□□□ -0.07
TDP1-212ENST00000555565 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
TDP1-212ENST00000555565 COL11A2P13942 1736 aaPredicted RBP14.61□□□□□ -0.07
TDP1-212ENST00000555565 TMEM88BA6NKF7 163 aa14.61□□□□□ -0.07
TDP1-212ENST00000555565 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
TDP1-212ENST00000555565 PDE6BP35913 854 aa14.61□□□□□ -0.07
TDP1-212ENST00000555565 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
TDP1-212ENST00000555565 C7orf43Q8WVR3 580 aa14.61□□□□□ -0.07
TDP1-212ENST00000555565 ABHD8Q96I13 439 aa14.61□□□□□ -0.07
TDP1-212ENST00000555565 VIRMAQ69YN4 1812 aaKnown RBP14.61□□□□□ -0.07
TDP1-212ENST00000555565 HSPA8P11142 646 aaKnown RBP14.6□□□□□ -0.07
TDP1-212ENST00000555565 FAM161AQ3B820 660 aa14.6□□□□□ -0.07
TDP1-212ENST00000555565 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
TDP1-212ENST00000555565 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
TDP1-212ENST00000555565 SRGNP10124 158 aa14.59□□□□□ -0.07
TDP1-212ENST00000555565 AIDAQ96BJ3 306 aa14.59□□□□□ -0.07
TDP1-212ENST00000555565 SLX4Q8IY92 1834 aa14.59□□□□□ -0.07
TDP1-212ENST00000555565 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
TDP1-212ENST00000555565 RGS19P49795 217 aa14.58□□□□□ -0.08
TDP1-212ENST00000555565 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms