RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 ZNF445P59923 1031 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 CUL4AQ13619 759 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 C1orf141Q5JVX7 400 aa12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 ZGPATQ8N5A5 531 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
RPGRIP1-208ENST00000555489 PI4KAP2A4QPH2 592 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 MTX1Q13505 466 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 GAS2L3Q86XJ1 694 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 PI4KAP1Q8N8J0 262 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 RRAGDQ9NQL2 400 aaPredicted RBP12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
RPGRIP1-208ENST00000555489 CAMTA1Q9Y6Y1 1673 aa12.08□□□□□ -0.47
RPGRIP1-208ENST00000555489 CLCN1P35523 988 aa12.08□□□□□ -0.47
RPGRIP1-208ENST00000555489 CNTROBQ8N137 903 aa12.08□□□□□ -0.47
RPGRIP1-208ENST00000555489 IL1RAPL2Q9NP60 686 aa12.08□□□□□ -0.47
RPGRIP1-208ENST00000555489 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 GCP02774 474 aa12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 PKP1Q13835 747 aa12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 ARHGEF25Q86VW2 580 aa12.08□□□□□ -0.48
RPGRIP1-208ENST00000555489 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 HSPA4P34932 840 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 CCDC173Q0VFZ6 552 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 ADCY9O60503 1353 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
RPGRIP1-208ENST00000555489 RAD50Q92878 1312 aa12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 ERC1Q8IUD2 1116 aa12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
RPGRIP1-208ENST00000555489 SGSM2O43147 1006 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 MBD3O95983 291 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 MPRIPQ6WCQ1 1025 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 LRRC59Q96AG4 307 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 KIF1AQ12756 1690 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 PXDNQ92626 1479 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 BRD1O95696 1058 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 HYPKQ9NX55 129 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 MST1RQ04912 1400 aa12.05□□□□□ -0.48
RPGRIP1-208ENST00000555489 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 ESPNB1AK53 854 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 PRPF40AO75400 957 aaKnown RBP12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 KCNQ3O43525 872 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 DDX58O95786 925 aaKnown RBP12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
RPGRIP1-208ENST00000555489 MAP3K2Q9Y2U5 619 aa12.03□□□□□ -0.48
RPGRIP1-208ENST00000555489 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
RPGRIP1-208ENST00000555489 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
RPGRIP1-208ENST00000555489 SIPA1L3O60292 1781 aaPredicted RBP12.02□□□□□ -0.48
RPGRIP1-208ENST00000555489 PLEKHG5O94827 1062 aa12.02□□□□□ -0.48
RPGRIP1-208ENST00000555489 LINS1Q8NG48 757 aa12.02□□□□□ -0.48
RPGRIP1-208ENST00000555489 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.48
RPGRIP1-208ENST00000555489 SETD1BQ9UPS6 1966 aaKnown RBP12.02□□□□□ -0.48
RPGRIP1-208ENST00000555489 WDR33Q9C0J8 1336 aaKnown RBP12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 ECHDC1Q9NTX5 307 aa12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
RPGRIP1-208ENST00000555489 UTYO14607 1347 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 GPT2Q8TD30 523 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 LSG1Q9H089 658 aaKnown RBP12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 IL25Q9H293 177 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 ANXA1P04083 346 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 SYAP1Q96A49 352 aaPredicted RBP12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
RPGRIP1-208ENST00000555489 ABCC6O95255 1503 aa12□□□□□ -0.49
RPGRIP1-208ENST00000555489 ERBB3P21860 1342 aa12□□□□□ -0.49
RPGRIP1-208ENST00000555489 GRM8O00222 908 aa12□□□□□ -0.49
RPGRIP1-208ENST00000555489 HIP1O00291 1037 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms