RNA–Protein interactions for RNA: ENST00000555243.1

PTPN21-207, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 5

Gene PTPN21, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-207ENST00000555243 A0A087WZG4 1122 aa18.14■□□□□ 0.49
PTPN21-207ENST00000555243 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
PTPN21-207ENST00000555243 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
PTPN21-207ENST00000555243 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPN21-207ENST00000555243 DDR1Q08345 913 aa18.14■□□□□ 0.49
PTPN21-207ENST00000555243 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
PTPN21-207ENST00000555243 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
PTPN21-207ENST00000555243 ZNF790Q6PG37 636 aa18.13■□□□□ 0.49
PTPN21-207ENST00000555243 IL17REQ8NFR9 667 aa18.13■□□□□ 0.49
PTPN21-207ENST00000555243 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
PTPN21-207ENST00000555243 KIF13BQ9NQT8 1826 aa18.13■□□□□ 0.49
PTPN21-207ENST00000555243 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
PTPN21-207ENST00000555243 NEFMP07197 916 aa18.12■□□□□ 0.49
PTPN21-207ENST00000555243 TM4SF1P30408 202 aa18.12■□□□□ 0.49
PTPN21-207ENST00000555243 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
PTPN21-207ENST00000555243 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
PTPN21-207ENST00000555243 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
PTPN21-207ENST00000555243 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-207ENST00000555243 RSPH6AQ9H0K4 717 aa18.11■□□□□ 0.49
PTPN21-207ENST00000555243 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-207ENST00000555243 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
PTPN21-207ENST00000555243 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
PTPN21-207ENST00000555243 NFIXQ14938 502 aa18.1■□□□□ 0.49
PTPN21-207ENST00000555243 ADAMTS7Q9UKP4 1686 aa18.09■□□□□ 0.49
PTPN21-207ENST00000555243 SERPINB2P05120 415 aa18.09■□□□□ 0.49
PTPN21-207ENST00000555243 KCNA3P22001 575 aa18.09■□□□□ 0.49
PTPN21-207ENST00000555243 CHRNA5P30532 468 aa18.09■□□□□ 0.49
PTPN21-207ENST00000555243 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
PTPN21-207ENST00000555243 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.48
PTPN21-207ENST00000555243 NPHP1O15259 732 aa18.07■□□□□ 0.48
PTPN21-207ENST00000555243 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
PTPN21-207ENST00000555243 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
PTPN21-207ENST00000555243 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
PTPN21-207ENST00000555243 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
PTPN21-207ENST00000555243 CEMIPQ8WUJ3 1361 aa18.06■□□□□ 0.48
PTPN21-207ENST00000555243 IL6STP40189 918 aaPredicted RBP18.06■□□□□ 0.48
PTPN21-207ENST00000555243 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
PTPN21-207ENST00000555243 H0YIN7 160 aa18.04■□□□□ 0.48
PTPN21-207ENST00000555243 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
PTPN21-207ENST00000555243 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
PTPN21-207ENST00000555243 TBC1D2BQ9UPU7 963 aa18.04■□□□□ 0.48
PTPN21-207ENST00000555243 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
PTPN21-207ENST00000555243 KIF3CO14782 793 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
PTPN21-207ENST00000555243 HSPA6P17066 643 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 MCM10Q7L590 875 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 C2CD5Q86YS7 1000 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
PTPN21-207ENST00000555243 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
PTPN21-207ENST00000555243 A1BGP04217 495 aa18.02■□□□□ 0.48
PTPN21-207ENST00000555243 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
PTPN21-207ENST00000555243 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
PTPN21-207ENST00000555243 KCNQ3O43525 872 aa18.01■□□□□ 0.47
PTPN21-207ENST00000555243 TOMM70O94826 608 aa18.01■□□□□ 0.47
PTPN21-207ENST00000555243 PDE6BP35913 854 aa18.01■□□□□ 0.47
PTPN21-207ENST00000555243 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
PTPN21-207ENST00000555243 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
PTPN21-207ENST00000555243 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
PTPN21-207ENST00000555243 CARMIL3Q8ND23 1372 aa18.01■□□□□ 0.47
PTPN21-207ENST00000555243 ZNF652Q9Y2D9 606 aa18■□□□□ 0.47
PTPN21-207ENST00000555243 ARFGEF1Q9Y6D6 1849 aa18■□□□□ 0.47
PTPN21-207ENST00000555243 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
PTPN21-207ENST00000555243 ST5P78524 1137 aa17.99■□□□□ 0.47
PTPN21-207ENST00000555243 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
PTPN21-207ENST00000555243 ZNF622Q969S3 477 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTPN21-207ENST00000555243 BRIP1Q9BX63 1249 aa17.99■□□□□ 0.47
PTPN21-207ENST00000555243 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
PTPN21-207ENST00000555243 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
PTPN21-207ENST00000555243 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
PTPN21-207ENST00000555243 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
PTPN21-207ENST00000555243 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
PTPN21-207ENST00000555243 SIPA1L3O60292 1781 aaPredicted RBP17.97■□□□□ 0.47
PTPN21-207ENST00000555243 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
PTPN21-207ENST00000555243 LMNB1P20700 586 aa17.97■□□□□ 0.47
PTPN21-207ENST00000555243 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
PTPN21-207ENST00000555243 RASSF7Q02833 373 aa17.96■□□□□ 0.47
PTPN21-207ENST00000555243 PRR5LQ6MZQ0 368 aa17.96■□□□□ 0.47
PTPN21-207ENST00000555243 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.46
PTPN21-207ENST00000555243 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
PTPN21-207ENST00000555243 NRXN2Q9P2S2 1712 aa17.95■□□□□ 0.46
PTPN21-207ENST00000555243 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
PTPN21-207ENST00000555243 CLEC4GQ6UXB4 293 aa17.95■□□□□ 0.46
PTPN21-207ENST00000555243 APLP1P51693 650 aa17.94■□□□□ 0.46
PTPN21-207ENST00000555243 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
PTPN21-207ENST00000555243 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
PTPN21-207ENST00000555243 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
PTPN21-207ENST00000555243 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
PTPN21-207ENST00000555243 CNKSR1Q969H4 720 aa17.93■□□□□ 0.46
PTPN21-207ENST00000555243 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
PTPN21-207ENST00000555243 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
PTPN21-207ENST00000555243 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
PTPN21-207ENST00000555243 NFE2L2Q16236 605 aa17.92■□□□□ 0.46
PTPN21-207ENST00000555243 IFFO2Q5TF58 517 aa17.92■□□□□ 0.46
PTPN21-207ENST00000555243 RGL2O15211 777 aa17.91■□□□□ 0.46
PTPN21-207ENST00000555243 C21orf2O43822 256 aa17.91■□□□□ 0.46
PTPN21-207ENST00000555243 RALBP1Q15311 655 aa17.91■□□□□ 0.46
PTPN21-207ENST00000555243 SOGA3Q5TF21 947 aa17.91■□□□□ 0.46
PTPN21-207ENST00000555243 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
PTPN21-207ENST00000555243 MIS18AQ9NYP9 233 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms