RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-216ENST00000555137 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
HNRNPC-216ENST00000555137 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
HNRNPC-216ENST00000555137 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
HNRNPC-216ENST00000555137 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 COL15A1P39059 1388 aa13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 HTRA3P83110 453 aa13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 NFIXQ14938 502 aa13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
HNRNPC-216ENST00000555137 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 CARMIL3Q8ND23 1372 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 ZPR1O75312 459 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 PRELPP51888 382 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 RASSF7Q02833 373 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 CCER1Q8TC90 406 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
HNRNPC-216ENST00000555137 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
HNRNPC-216ENST00000555137 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-216ENST00000555137 PCNTO95613 3336 aa13.11□□□□□ -0.31
HNRNPC-216ENST00000555137 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-216ENST00000555137 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-216ENST00000555137 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
HNRNPC-216ENST00000555137 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
HNRNPC-216ENST00000555137 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 SERPINB2P05120 415 aa13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 TIAM2Q8IVF5 1701 aa13.08□□□□□ -0.32
HNRNPC-216ENST00000555137 EIF5P55010 431 aaKnown RBP13.07□□□□□ -0.32
HNRNPC-216ENST00000555137 FSTL1Q12841 308 aa13.07□□□□□ -0.32
HNRNPC-216ENST00000555137 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-216ENST00000555137 COL11A2P13942 1736 aaPredicted RBP13.07□□□□□ -0.32
HNRNPC-216ENST00000555137 NFKBIEO00221 500 aa13.06□□□□□ -0.32
HNRNPC-216ENST00000555137 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
HNRNPC-216ENST00000555137 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
HNRNPC-216ENST00000555137 IL17REQ8NFR9 667 aa13.06□□□□□ -0.32
HNRNPC-216ENST00000555137 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
HNRNPC-216ENST00000555137 LMNB1P20700 586 aa13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
HNRNPC-216ENST00000555137 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-216ENST00000555137 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
HNRNPC-216ENST00000555137 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HNRNPC-216ENST00000555137 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
HNRNPC-216ENST00000555137 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
HNRNPC-216ENST00000555137 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-216ENST00000555137 STARD3NLO95772 234 aa13.03□□□□□ -0.32
HNRNPC-216ENST00000555137 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
HNRNPC-216ENST00000555137 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 H0YIN7 160 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 KCNQ3O43525 872 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 TEFQ10587 303 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.33
HNRNPC-216ENST00000555137 POTECB2RU33 542 aa13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 A1BGP04217 495 aa13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
HNRNPC-216ENST00000555137 A0A087WZG4 1122 aa13□□□□□ -0.33
HNRNPC-216ENST00000555137 C21orf2O43822 256 aa13□□□□□ -0.33
HNRNPC-216ENST00000555137 CAMTA2O94983 1202 aa13□□□□□ -0.33
HNRNPC-216ENST00000555137 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
HNRNPC-216ENST00000555137 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
HNRNPC-216ENST00000555137 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
HNRNPC-216ENST00000555137 BRIP1Q9BX63 1249 aa13□□□□□ -0.33
HNRNPC-216ENST00000555137 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
HNRNPC-216ENST00000555137 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
HNRNPC-216ENST00000555137 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-216ENST00000555137 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
HNRNPC-216ENST00000555137 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
HNRNPC-216ENST00000555137 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
HNRNPC-216ENST00000555137 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
HNRNPC-216ENST00000555137 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
HNRNPC-216ENST00000555137 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
HNRNPC-216ENST00000555137 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
HNRNPC-216ENST00000555137 PDE6BP35913 854 aa12.97□□□□□ -0.33
HNRNPC-216ENST00000555137 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
HNRNPC-216ENST00000555137 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
HNRNPC-216ENST00000555137 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
HNRNPC-216ENST00000555137 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.33
HNRNPC-216ENST00000555137 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
HNRNPC-216ENST00000555137 SRGNP10124 158 aa12.96□□□□□ -0.33
HNRNPC-216ENST00000555137 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
HNRNPC-216ENST00000555137 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms