RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
NEDD1-207ENST00000555114 NARFQ9UHQ1 456 aa20.93■□□□□ 0.94
NEDD1-207ENST00000555114 COL15A1P39059 1388 aa20.93■□□□□ 0.94
NEDD1-207ENST00000555114 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
NEDD1-207ENST00000555114 TTC5Q8N0Z6 440 aa20.92■□□□□ 0.94
NEDD1-207ENST00000555114 RBM46Q8TBY0 533 aaKnown RBP20.92■□□□□ 0.94
NEDD1-207ENST00000555114 STARD3NLO95772 234 aa20.9■□□□□ 0.94
NEDD1-207ENST00000555114 CC2D1BQ5T0F9 858 aaKnown RBP20.9■□□□□ 0.94
NEDD1-207ENST00000555114 ZBTB1Q9Y2K1 713 aa20.9■□□□□ 0.94
NEDD1-207ENST00000555114 KCPQ6ZWJ8 1503 aa20.89■□□□□ 0.94
NEDD1-207ENST00000555114 NFIXQ14938 502 aa20.89■□□□□ 0.93
NEDD1-207ENST00000555114 ADAMTS7Q9UKP4 1686 aa20.89■□□□□ 0.93
NEDD1-207ENST00000555114 A0A087WZG4 1122 aa20.88■□□□□ 0.93
NEDD1-207ENST00000555114 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
NEDD1-207ENST00000555114 SERPINB2P05120 415 aa20.87■□□□□ 0.93
NEDD1-207ENST00000555114 CANXP27824 592 aaKnown RBP20.87■□□□□ 0.93
NEDD1-207ENST00000555114 TEFQ10587 303 aa20.87■□□□□ 0.93
NEDD1-207ENST00000555114 FSTL1Q12841 308 aa20.87■□□□□ 0.93
NEDD1-207ENST00000555114 GAS2L2Q8NHY3 880 aa20.87■□□□□ 0.93
NEDD1-207ENST00000555114 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
NEDD1-207ENST00000555114 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
NEDD1-207ENST00000555114 U2SURPO15042 1029 aaKnown RBP20.85■□□□□ 0.93
NEDD1-207ENST00000555114 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
NEDD1-207ENST00000555114 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
NEDD1-207ENST00000555114 H0YIN7 160 aa20.84■□□□□ 0.93
NEDD1-207ENST00000555114 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
NEDD1-207ENST00000555114 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
NEDD1-207ENST00000555114 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 LMNB1P20700 586 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 C2CD5Q86YS7 1000 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 BCL2L12Q9HB09 334 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 RRAGCQ9HB90 399 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 PDZRN3Q9UPQ7 1066 aa20.83■□□□□ 0.93
NEDD1-207ENST00000555114 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
NEDD1-207ENST00000555114 RASSF7Q02833 373 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 ZNF790Q6PG37 636 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 BICDL1Q6ZP65 573 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 DNAJC5GQ8N7S2 189 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 SMC1BQ8NDV3 1235 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
NEDD1-207ENST00000555114 AFDNP55196 1824 aaKnown RBP20.81■□□□□ 0.92
NEDD1-207ENST00000555114 TNRC6CQ9HCJ0 1690 aaKnown RBP20.8■□□□□ 0.92
NEDD1-207ENST00000555114 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-207ENST00000555114 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-207ENST00000555114 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
NEDD1-207ENST00000555114 HEG1Q9ULI3 1381 aa20.8■□□□□ 0.92
NEDD1-207ENST00000555114 PDE6BP35913 854 aa20.79■□□□□ 0.92
NEDD1-207ENST00000555114 CFAP53Q96M91 514 aa20.79■□□□□ 0.92
NEDD1-207ENST00000555114 FMNL2Q96PY5 1086 aa20.79■□□□□ 0.92
NEDD1-207ENST00000555114 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
NEDD1-207ENST00000555114 SBF1O95248 1867 aa20.78■□□□□ 0.92
NEDD1-207ENST00000555114 COL3A1P02461 1466 aaPredicted RBP20.78■□□□□ 0.92
NEDD1-207ENST00000555114 NPHP1O15259 732 aa20.78■□□□□ 0.92
NEDD1-207ENST00000555114 IL6STP40189 918 aaPredicted RBP20.78■□□□□ 0.92
NEDD1-207ENST00000555114 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
NEDD1-207ENST00000555114 CARMIL3Q8ND23 1372 aa20.77■□□□□ 0.92
NEDD1-207ENST00000555114 GLTPD2A6NH11 291 aa20.77■□□□□ 0.92
NEDD1-207ENST00000555114 KLRG1Q96E93 195 aa20.77■□□□□ 0.92
NEDD1-207ENST00000555114 BRIP1Q9BX63 1249 aa20.77■□□□□ 0.92
NEDD1-207ENST00000555114 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.91
NEDD1-207ENST00000555114 VEGFAP15692 232 aaPredicted RBP20.76■□□□□ 0.91
NEDD1-207ENST00000555114 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
NEDD1-207ENST00000555114 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.91
NEDD1-207ENST00000555114 TBC1D2BQ9UPU7 963 aa20.75■□□□□ 0.91
NEDD1-207ENST00000555114 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
NEDD1-207ENST00000555114 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
NEDD1-207ENST00000555114 DPY19L2Q6NUT2 758 aa20.74■□□□□ 0.91
NEDD1-207ENST00000555114 SETDB2Q96T68 719 aa20.74■□□□□ 0.91
NEDD1-207ENST00000555114 ST5P78524 1137 aa20.73■□□□□ 0.91
NEDD1-207ENST00000555114 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
NEDD1-207ENST00000555114 SCN7AQ01118 1682 aa20.73■□□□□ 0.91
NEDD1-207ENST00000555114 CEMIPQ8WUJ3 1361 aa20.72■□□□□ 0.91
NEDD1-207ENST00000555114 NFKBIEO00221 500 aa20.72■□□□□ 0.91
NEDD1-207ENST00000555114 PRKAR2BP31323 418 aa20.72■□□□□ 0.91
NEDD1-207ENST00000555114 PRR5LQ6MZQ0 368 aa20.72■□□□□ 0.91
NEDD1-207ENST00000555114 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
NEDD1-207ENST00000555114 A1BGP04217 495 aa20.71■□□□□ 0.91
NEDD1-207ENST00000555114 HTRA3P83110 453 aa20.71■□□□□ 0.91
NEDD1-207ENST00000555114 JMYQ8N9B5 988 aa20.71■□□□□ 0.91
NEDD1-207ENST00000555114 CNKSR1Q969H4 720 aa20.71■□□□□ 0.91
NEDD1-207ENST00000555114 C21orf2O43822 256 aa20.7■□□□□ 0.9
NEDD1-207ENST00000555114 SOGA3Q5TF21 947 aa20.7■□□□□ 0.9
NEDD1-207ENST00000555114 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
NEDD1-207ENST00000555114 SIPA1L3O60292 1781 aaPredicted RBP20.69■□□□□ 0.9
NEDD1-207ENST00000555114 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
NEDD1-207ENST00000555114 PRELPP51888 382 aa20.69■□□□□ 0.9
NEDD1-207ENST00000555114 ERFEQ4G0M1 354 aa20.69■□□□□ 0.9
NEDD1-207ENST00000555114 RSPH6AQ9H0K4 717 aa20.69■□□□□ 0.9
NEDD1-207ENST00000555114 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
NEDD1-207ENST00000555114 ZNF652Q9Y2D9 606 aa20.69■□□□□ 0.9
NEDD1-207ENST00000555114 TIAM2Q8IVF5 1701 aa20.68■□□□□ 0.9
NEDD1-207ENST00000555114 STYK1Q6J9G0 422 aa20.68■□□□□ 0.9
NEDD1-207ENST00000555114 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
NEDD1-207ENST00000555114 TAOK3Q9H2K8 898 aa20.68■□□□□ 0.9
NEDD1-207ENST00000555114 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
NEDD1-207ENST00000555114 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
NEDD1-207ENST00000555114 CCDC24Q8N4L8 307 aa20.67■□□□□ 0.9
NEDD1-207ENST00000555114 MASTLQ96GX5 879 aa20.67■□□□□ 0.9
NEDD1-207ENST00000555114 LTBP3Q9NS15 1303 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms