RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-208	ENST00000555094	AFF2	P51816	1311 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	KDM2B	Q8NHM5	1336 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	FLII	Q13045	1269 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	FMNL2	Q96PY5	1086 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	CHMP4A	Q9BY43	222 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	CHPF2	Q9P2E5	772 aa		13.8	□□□□□ -0.2
GABRB3-208	ENST00000555094	EIF2S2	P20042	333 aa	Known RBP	13.79	□□□□□ -0.2
GABRB3-208	ENST00000555094	INTS3	Q68E01	1043 aa	Known RBP	13.79	□□□□□ -0.2
GABRB3-208	ENST00000555094	TMOD3	Q9NYL9	352 aa		13.79	□□□□□ -0.2
GABRB3-208	ENST00000555094	TJP1	Q07157	1748 aa		13.78	□□□□□ -0.2
GABRB3-208	ENST00000555094	FAM98C	Q17RN3	349 aa	Known RBP	13.78	□□□□□ -0.2
GABRB3-208	ENST00000555094	MARCH10	Q8NA82	808 aa	Predicted RBP	13.78	□□□□□ -0.2
GABRB3-208	ENST00000555094	CIC	Q96RK0	1608 aa	Predicted RBP	13.77	□□□□□ -0.2
GABRB3-208	ENST00000555094	SNRPA1	P09661	255 aa	Known RBP	13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	PROSER3	Q2NL68	480 aa		13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	PIGB	Q92521	554 aa		13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	ZBTB40	Q9NUA8	1239 aa		13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	DBF4	Q9UBU7	674 aa	Predicted RBP	13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	PCDHB15	Q9Y5E8	787 aa		13.77	□□□□□ -0.21
GABRB3-208	ENST00000555094	ANXA1	P04083	346 aa		13.76	□□□□□ -0.21
GABRB3-208	ENST00000555094	FKBP5	Q13451	457 aa	Predicted RBP	13.76	□□□□□ -0.21
GABRB3-208	ENST00000555094	PHAX	Q9H814	394 aa	Known RBP	13.76	□□□□□ -0.21
GABRB3-208	ENST00000555094	KAT6B	Q8WYB5	2073 aa		13.76	□□□□□ -0.21
GABRB3-208	ENST00000555094		F6X3S4	739 aa		13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	PDIA6	Q15084	440 aa		13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	NHS	Q6T4R5	1651 aa		13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	ARFGEF2	Q9Y6D5	1785 aa		13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	ADCY9	O60503	1353 aa		13.75	□□□□□ -0.21
GABRB3-208	ENST00000555094	ZBTB7B	O15156	539 aa	Predicted RBP	13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	NUP188	Q5SRE5	1749 aa		13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	ATP10D	Q9P241	1426 aa		13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	CCT4	P50991	539 aa	Known RBP	13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	ATG3	Q9NT62	314 aa		13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	ASAP1	Q9ULH1	1129 aa		13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	USP16	Q9Y5T5	823 aa		13.74	□□□□□ -0.21
GABRB3-208	ENST00000555094	IGHD	P01880	384 aa		13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	LRP10	Q7Z4F1	713 aa		13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	PELP1	Q8IZL8	1130 aa	Known RBP	13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	GJD4	Q96KN9	370 aa	Predicted RBP	13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	CHMP4B	Q9H444	224 aa	Known RBP	13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	HYPK	Q9NX55	129 aa		13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	SBF2	Q86WG5	1849 aa		13.73	□□□□□ -0.21
GABRB3-208	ENST00000555094	ERBB4	Q15303	1308 aa		13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	ZNF831	Q5JPB2	1677 aa		13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	RREB1	Q92766	1687 aa		13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	PTCD1	O75127	700 aa	Known RBP	13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	PRIM1	P49642	420 aa	Known RBP	13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	SLC4A10	Q6U841	1118 aa		13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	TRPC5	Q9UL62	973 aa	Predicted RBP	13.72	□□□□□ -0.21
GABRB3-208	ENST00000555094	BTAF1	O14981	1849 aa		13.71	□□□□□ -0.21
GABRB3-208	ENST00000555094	VSIG10	Q8N0Z9	540 aa		13.71	□□□□□ -0.21
GABRB3-208	ENST00000555094	BRWD3	Q6RI45	1802 aa		13.71	□□□□□ -0.21
GABRB3-208	ENST00000555094	AFDN	P55196	1824 aa	Known RBP	13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	HOXD11	P31277	338 aa	Predicted RBP	13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	HDAC1	Q13547	482 aa	Predicted RBP	13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	MEIS3	Q99687	375 aa		13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	C1orf115	Q9H7X2	142 aa		13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	COL5A3	P25940	1745 aa	Predicted RBP	13.7	□□□□□ -0.22
GABRB3-208	ENST00000555094	PI4KAP2	A4QPH2	592 aa		13.69	□□□□□ -0.22
GABRB3-208	ENST00000555094	PI4KAP1	Q8N8J0	262 aa		13.69	□□□□□ -0.22
GABRB3-208	ENST00000555094	DNAAF4	Q8WXU2	420 aa		13.69	□□□□□ -0.22
GABRB3-208	ENST00000555094	SYTL4	Q96C24	671 aa	Predicted RBP	13.69	□□□□□ -0.22
GABRB3-208	ENST00000555094	ACSBG1	Q96GR2	724 aa		13.69	□□□□□ -0.22
GABRB3-208	ENST00000555094		A0A0G2JS52	829 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	NBPF26	B4DH59	902 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	ONECUT3	O60422	494 aa	Predicted RBP	13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	MYL6B	P14649	208 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	PIP4K2A	P48426	406 aa	Predicted RBP	13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	MYT1	Q01538	1121 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	NBPF14	Q5TI25	921 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	NBPF10	Q6P3W6	841 aa	Known RBP	13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	NBPF15	Q8N660	670 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	XAGE3	Q8WTP9	111 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	SLC4A9	Q96Q91	983 aa		13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	RWDD1	Q9H446	243 aa	Predicted RBP	13.68	□□□□□ -0.22
GABRB3-208	ENST00000555094	BEND3	Q5T5X7	828 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	KSR2	Q6VAB6	950 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	DNAJC10	Q8IXB1	793 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	DDX58	O95786	925 aa	Known RBP	13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	SKAP1	Q86WV1	359 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	RBM42	Q9BTD8	480 aa	Known RBP	13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	SRCIN1	Q9C0H9	1055 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	MAP3K2	Q9Y2U5	619 aa		13.67	□□□□□ -0.22
GABRB3-208	ENST00000555094	PALLD	Q8WX93	1383 aa		13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	KCNQ2	O43526	872 aa		13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	A1BG	P04217	495 aa		13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	AIMP1	Q12904	312 aa	Known RBP	13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	COPS6	Q7L5N1	327 aa		13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	SIRT2	Q8IXJ6	389 aa		13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	QTRT2	Q9H974	415 aa	Known RBP	13.66	□□□□□ -0.22
GABRB3-208	ENST00000555094	LY75	O60449	1722 aa		13.65	□□□□□ -0.22
GABRB3-208	ENST00000555094	SEPT12	Q8IYM1	358 aa		13.65	□□□□□ -0.22
GABRB3-208	ENST00000555094	ANKRD36C	Q5JPF3	1778 aa		13.64	□□□□□ -0.23
GABRB3-208	ENST00000555094	ALDH1L1	O75891	902 aa		13.64	□□□□□ -0.23
GABRB3-208	ENST00000555094	GNAI3	P08754	354 aa		13.64	□□□□□ -0.23
GABRB3-208	ENST00000555094	CEP85	Q6P2H3	762 aa		13.64	□□□□□ -0.23

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