RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 HSCBQ8IWL3 235 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
PRKCH-211ENST00000555082 EXOC5O00471 708 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-211ENST00000555082 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
PRKCH-211ENST00000555082 STK31Q9BXU1 1019 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
PRKCH-211ENST00000555082 MRE11P49959 708 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
PRKCH-211ENST00000555082 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-211ENST00000555082 SPATA31A5Q5VU36 1347 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 SPATA31A7Q8IWB4 1347 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 DISP2A7MBM2 1401 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 SLIT2O94813 1529 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 HSP90AB1P08238 724 aaKnown RBP12.29□□□□□ -0.44
PRKCH-211ENST00000555082 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 USP21Q9UK80 565 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 BCL9LQ86UU0 1499 aa12.29□□□□□ -0.44
PRKCH-211ENST00000555082 FLIIQ13045 1269 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 ACSBG1Q96GR2 724 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 PLCH1Q4KWH8 1693 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 ESPNB1AK53 854 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
PRKCH-211ENST00000555082 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
PRKCH-211ENST00000555082 GLIPR1L2Q4G1C9 344 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
PRKCH-211ENST00000555082 DDB1Q16531 1140 aa12.27□□□□□ -0.44
PRKCH-211ENST00000555082 ZMYND15Q9H091 742 aa12.27□□□□□ -0.44
PRKCH-211ENST00000555082 RGS12O14924 1447 aa12.27□□□□□ -0.44
PRKCH-211ENST00000555082 PIGBQ92521 554 aa12.27□□□□□ -0.45
PRKCH-211ENST00000555082 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
PRKCH-211ENST00000555082 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
PRKCH-211ENST00000555082 ABCC4O15439 1325 aa12.27□□□□□ -0.45
PRKCH-211ENST00000555082 MARCH10Q8NA82 808 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-211ENST00000555082 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
PRKCH-211ENST00000555082 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 KAT6BQ8WYB5 2073 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 MYL6BP14649 208 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
PRKCH-211ENST00000555082 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 DDX19BQ9UMR2 479 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 HEG1Q9ULI3 1381 aa12.26□□□□□ -0.45
PRKCH-211ENST00000555082 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
PRKCH-211ENST00000555082 AFF2P51816 1311 aa12.25□□□□□ -0.45
PRKCH-211ENST00000555082 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
PRKCH-211ENST00000555082 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
PRKCH-211ENST00000555082 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
PRKCH-211ENST00000555082 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
PRKCH-211ENST00000555082 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 VPS72Q15906 364 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 ZBTB40Q9NUA8 1239 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 PDIA6Q15084 440 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 MEIS3Q99687 375 aa12.24□□□□□ -0.45
PRKCH-211ENST00000555082 KCNQ2O43526 872 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
PRKCH-211ENST00000555082 THRAP3Q9Y2W1 955 aaKnown RBP12.23□□□□□ -0.45
PRKCH-211ENST00000555082 PTPRCP08575 1304 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 HOXB7P09629 217 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
PRKCH-211ENST00000555082 MRC1P22897 1456 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
PRKCH-211ENST00000555082 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
PRKCH-211ENST00000555082 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
PRKCH-211ENST00000555082 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
PRKCH-211ENST00000555082 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
PRKCH-211ENST00000555082 A1BGP04217 495 aa12.22□□□□□ -0.45
PRKCH-211ENST00000555082 AAMPQ13685 434 aa12.22□□□□□ -0.45
PRKCH-211ENST00000555082 INTS3Q68E01 1043 aaKnown RBP12.22□□□□□ -0.45
PRKCH-211ENST00000555082 BARGINQ6ZT62 677 aa12.22□□□□□ -0.45
PRKCH-211ENST00000555082 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
PRKCH-211ENST00000555082 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
PRKCH-211ENST00000555082 RRP9O43818 475 aaKnown RBP12.21□□□□□ -0.45
PRKCH-211ENST00000555082 TOGARAM1Q9Y4F4 1720 aa12.21□□□□□ -0.46
PRKCH-211ENST00000555082 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.46
PRKCH-211ENST00000555082 ZNF330Q9Y3S2 320 aaPredicted RBP12.21□□□□□ -0.46
PRKCH-211ENST00000555082 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 CDCA7Q9BWT1 371 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-211ENST00000555082 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
PRKCH-211ENST00000555082 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
PRKCH-211ENST00000555082 SSFA2P28290 1259 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms