RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
ARHGEF40-205ENST00000555052 NRXN2Q9P2S2 1712 aa21.15■□□□□ 0.98
ARHGEF40-205ENST00000555052 AFDNP55196 1824 aaKnown RBP21.14■□□□□ 0.97
ARHGEF40-205ENST00000555052 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
ARHGEF40-205ENST00000555052 ARHGAP27Q6ZUM4 889 aa21.14■□□□□ 0.97
ARHGEF40-205ENST00000555052 PIM2Q9P1W9 311 aa21.14■□□□□ 0.97
ARHGEF40-205ENST00000555052 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
ARHGEF40-205ENST00000555052 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
ARHGEF40-205ENST00000555052 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
ARHGEF40-205ENST00000555052 CHRNA5P30532 468 aa21.12■□□□□ 0.97
ARHGEF40-205ENST00000555052 CNGB1Q14028 1251 aaPredicted RBP21.12■□□□□ 0.97
ARHGEF40-205ENST00000555052 NFIXQ14938 502 aa21.12■□□□□ 0.97
ARHGEF40-205ENST00000555052 DALRD3Q5D0E6 543 aaKnown RBP21.12■□□□□ 0.97
ARHGEF40-205ENST00000555052 GNAT3A8MTJ3 354 aa21.11■□□□□ 0.97
ARHGEF40-205ENST00000555052 HSPA6P17066 643 aa21.11■□□□□ 0.97
ARHGEF40-205ENST00000555052 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
ARHGEF40-205ENST00000555052 EIF5P55010 431 aaKnown RBP21.1■□□□□ 0.97
ARHGEF40-205ENST00000555052 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
ARHGEF40-205ENST00000555052 ZNF496Q96IT1 587 aaPredicted RBP21.1■□□□□ 0.97
ARHGEF40-205ENST00000555052 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
ARHGEF40-205ENST00000555052 STARD3NLO95772 234 aa21.09■□□□□ 0.97
ARHGEF40-205ENST00000555052 TEFQ10587 303 aa21.09■□□□□ 0.97
ARHGEF40-205ENST00000555052 ZNF790Q6PG37 636 aa21.09■□□□□ 0.97
ARHGEF40-205ENST00000555052 RSPH6AQ9H0K4 717 aa21.09■□□□□ 0.97
ARHGEF40-205ENST00000555052 C9orf131Q5VYM1 1079 aa21.08■□□□□ 0.97
ARHGEF40-205ENST00000555052 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.97
ARHGEF40-205ENST00000555052 DLEC1Q9Y238 1755 aa21.08■□□□□ 0.96
ARHGEF40-205ENST00000555052 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
ARHGEF40-205ENST00000555052 SCN7AQ01118 1682 aa21.07■□□□□ 0.96
ARHGEF40-205ENST00000555052 SBF1O95248 1867 aa21.07■□□□□ 0.96
ARHGEF40-205ENST00000555052 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
ARHGEF40-205ENST00000555052 PCNTO95613 3336 aa21.06■□□□□ 0.96
ARHGEF40-205ENST00000555052 SERPINB2P05120 415 aa21.05■□□□□ 0.96
ARHGEF40-205ENST00000555052 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
ARHGEF40-205ENST00000555052 TEX13AQ9BXU3 409 aaPredicted RBP21.05■□□□□ 0.96
ARHGEF40-205ENST00000555052 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
ARHGEF40-205ENST00000555052 CARMIL3Q8ND23 1372 aa21.05■□□□□ 0.96
ARHGEF40-205ENST00000555052 A0A087WZG4 1122 aa21.04■□□□□ 0.96
ARHGEF40-205ENST00000555052 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
ARHGEF40-205ENST00000555052 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
ARHGEF40-205ENST00000555052 TOMM70O94826 608 aa21.02■□□□□ 0.96
ARHGEF40-205ENST00000555052 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
ARHGEF40-205ENST00000555052 RNF181Q9P0P0 153 aa21.02■□□□□ 0.96
ARHGEF40-205ENST00000555052 ANKRD31Q8N7Z5 1873 aa21.01■□□□□ 0.95
ARHGEF40-205ENST00000555052 KCNQ3O43525 872 aa21.01■□□□□ 0.95
ARHGEF40-205ENST00000555052 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
ARHGEF40-205ENST00000555052 TBC1D9BQ66K14 1250 aa21■□□□□ 0.95
ARHGEF40-205ENST00000555052 BTBD11A6QL63 1104 aa20.99■□□□□ 0.95
ARHGEF40-205ENST00000555052 BICDL1Q6ZP65 573 aa20.99■□□□□ 0.95
ARHGEF40-205ENST00000555052 TBC1D2BQ9UPU7 963 aa20.99■□□□□ 0.95
ARHGEF40-205ENST00000555052 BCORQ6W2J9 1755 aa20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 A1BGP04217 495 aa20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 U2AF1L5P0DN76 240 aaPredicted RBP20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 U2AF1Q01081 240 aaKnown RBP eCLIP20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 RASSF7Q02833 373 aa20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
ARHGEF40-205ENST00000555052 CAMTA2O94983 1202 aa20.97■□□□□ 0.95
ARHGEF40-205ENST00000555052 ZC3H4Q9UPT8 1303 aaKnown RBP20.97■□□□□ 0.95
ARHGEF40-205ENST00000555052 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 COL11A2P13942 1736 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 H0YIN7 160 aa20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 PRELPP51888 382 aa20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 PRR5LQ6MZQ0 368 aa20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 MCM10Q7L590 875 aa20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 RBM46Q8TBY0 533 aaKnown RBP20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 ZNF330Q9Y3S2 320 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
ARHGEF40-205ENST00000555052 APLP1P51693 650 aa20.95■□□□□ 0.94
ARHGEF40-205ENST00000555052 BRIP1Q9BX63 1249 aa20.95■□□□□ 0.94
ARHGEF40-205ENST00000555052 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
ARHGEF40-205ENST00000555052 LMNB1P20700 586 aa20.94■□□□□ 0.94
ARHGEF40-205ENST00000555052 PDZRN3Q9UPQ7 1066 aa20.94■□□□□ 0.94
ARHGEF40-205ENST00000555052 USP16Q9Y5T5 823 aa20.94■□□□□ 0.94
ARHGEF40-205ENST00000555052 NFKBIEO00221 500 aa20.93■□□□□ 0.94
ARHGEF40-205ENST00000555052 HTATSF1O43719 755 aaKnown RBP20.93■□□□□ 0.94
ARHGEF40-205ENST00000555052 RTF1Q92541 710 aaKnown RBP20.93■□□□□ 0.94
ARHGEF40-205ENST00000555052 PDE6BP35913 854 aa20.92■□□□□ 0.94
ARHGEF40-205ENST00000555052 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
ARHGEF40-205ENST00000555052 DZIP3Q86Y13 1208 aaKnown RBP20.92■□□□□ 0.94
ARHGEF40-205ENST00000555052 CCDC88AQ3V6T2 1871 aa20.92■□□□□ 0.94
ARHGEF40-205ENST00000555052 SNRPA1P09661 255 aaKnown RBP20.91■□□□□ 0.94
ARHGEF40-205ENST00000555052 PIP4K2AP48426 406 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF40-205ENST00000555052 TIAM2Q8IVF5 1701 aa20.91■□□□□ 0.94
ARHGEF40-205ENST00000555052 CCDC24Q8N4L8 307 aa20.91■□□□□ 0.94
ARHGEF40-205ENST00000555052 SETDB2Q96T68 719 aa20.91■□□□□ 0.94
ARHGEF40-205ENST00000555052 FER1L6Q2WGJ9 1857 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 FSTL1Q12841 308 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 C16orf71Q8IYS4 520 aaPredicted RBP20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 DNAJC5GQ8N7S2 189 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 RRAGCQ9HB90 399 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 WDR90Q96KV7 1748 aa20.9■□□□□ 0.94
ARHGEF40-205ENST00000555052 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
ARHGEF40-205ENST00000555052 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
ARHGEF40-205ENST00000555052 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
ARHGEF40-205ENST00000555052 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
ARHGEF40-205ENST00000555052 ZNF622Q969S3 477 aaKnown RBP eCLIP20.88■□□□□ 0.93
ARHGEF40-205ENST00000555052 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms