RNA–Protein interactions for RNA: ENST00000555010.1

FOXN3-207, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-207ENST00000555010 PIP4K2BP78356 416 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 SEMA3FQ13275 785 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 SCARF1Q14162 830 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 LINC00528Q8N1L1 170 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 ZNF775Q96BV0 537 aaPredicted RBP4.74□□□□□ -1.65
FOXN3-207ENST00000555010 CCDC85AQ96PX6 553 aaPredicted RBP4.74□□□□□ -1.65
FOXN3-207ENST00000555010 PLXNC1O60486 1568 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 SAMD9LQ8IVG5 1584 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 VWDEQ8N2E2 1590 aa4.74□□□□□ -1.65
FOXN3-207ENST00000555010 CPS1P31327 1500 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 UPP2O95045 317 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 VEGFBP49765 207 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 WASHC4Q2M389 1173 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 MEIOBQ8N635 442 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 TRIM47Q96LD4 638 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 SENP2Q9HC62 589 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 SHANK2Q9UPX8 1470 aa4.73□□□□□ -1.65
FOXN3-207ENST00000555010 XIRP1Q702N8 1843 aaKnown RBP4.72□□□□□ -1.65
FOXN3-207ENST00000555010 PIK3CDO00329 1044 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 TOM1O60784 492 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 CTSOP43234 321 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-207ENST00000555010 SLFNL1Q499Z3 407 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 HDGFL1Q5TGJ6 251 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 RNF20Q5VTR2 975 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 Q6ZVU0 165 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 INSM2Q96T92 566 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-207ENST00000555010 TSEN34Q9BSV6 310 aaKnown RBP4.72□□□□□ -1.65
FOXN3-207ENST00000555010 ESF1Q9H501 851 aaKnown RBP4.72□□□□□ -1.65
FOXN3-207ENST00000555010 A2ML1A8K2U0 1454 aa4.72□□□□□ -1.65
FOXN3-207ENST00000555010 ARHGAP35Q9NRY4 1499 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 MAN1A2O60476 641 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 STAU1O95793 577 aaKnown RBP4.71□□□□□ -1.66
FOXN3-207ENST00000555010 MCCD1P59942 119 aaPredicted RBP4.71□□□□□ -1.66
FOXN3-207ENST00000555010 OXLD1Q5BKU9 147 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 RNF135Q8IUD6 432 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 WWC1Q8IX03 1113 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 SEPT12Q8IYM1 358 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 PHTF2Q8N3S3 785 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 KDF1Q8NAX2 398 aaPredicted RBP4.71□□□□□ -1.66
FOXN3-207ENST00000555010 KIFC2Q96AC6 838 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 POLMQ9NP87 494 aaPredicted RBP4.71□□□□□ -1.66
FOXN3-207ENST00000555010 GTF3C3Q9Y5Q9 886 aa4.71□□□□□ -1.66
FOXN3-207ENST00000555010 INO80Q9ULG1 1556 aaPredicted RBP4.7□□□□□ -1.66
FOXN3-207ENST00000555010 MEN1O00255 615 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 ADH1AP07327 375 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 PTGIRP43119 386 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 CC2D2BQ6DHV5 1058 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 POTEAQ6S8J7 498 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 ADAMTS19Q8TE59 1207 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 ALG2Q9H553 416 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 RAB6BQ9NRW1 208 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 DNMT3LQ9UJW3 386 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 ZNF777Q9ULD5 760 aaPredicted RBP4.7□□□□□ -1.66
FOXN3-207ENST00000555010 CDK11AQ9UQ88 783 aaPredicted RBP4.7□□□□□ -1.66
FOXN3-207ENST00000555010 ATP7AQ04656 1500 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 FMN1Q68DA7 1419 aa4.7□□□□□ -1.66
FOXN3-207ENST00000555010 MED14O60244 1454 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 A2MP01023 1474 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 SETD1AO15047 1707 aaKnown RBP4.69□□□□□ -1.66
FOXN3-207ENST00000555010 DEPDC5O75140 1603 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 LRRC7Q96NW7 1537 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 SYCP2Q9BX26 1530 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 TTLL8A6PVC2 850 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 ATP5J2-PTCD1G3V325 749 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 SKIP12755 728 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 HNRNPMP52272 730 aaKnown RBP eCLIP4.69□□□□□ -1.661e-7■■■■■ 30.4
FOXN3-207ENST00000555010 ERVK-9P63128 1117 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 PROSER2Q86WR7 435 aaPredicted RBP4.69□□□□□ -1.66
FOXN3-207ENST00000555010 DEPDC4Q8N2C3 294 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 OSBPL3Q9H4L5 887 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 DOLKQ9UPQ8 538 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 ADGBQ8N7X0 1667 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 CLIP1P30622 1438 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 EEA1Q15075 1411 aa4.69□□□□□ -1.66
FOXN3-207ENST00000555010 SOS2Q07890 1332 aaPredicted RBP4.69□□□□□ -1.66
FOXN3-207ENST00000555010 CFAP65Q6ZU64 1925 aaKnown RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 GPATCH8Q9UKJ3 1502 aaKnown RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 IQGAP1P46940 1657 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 ZC3H13Q5T200 1668 aaKnown RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 SRCAPQ6ZRS2 3230 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 A0A1W2PRU2 124 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 SPINT1O43278 529 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 GGT6Q6P531 493 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 PRICKLE2Q7Z3G6 844 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 FNBP4Q8N3X1 1017 aaPredicted RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 PLPP7Q8NBV4 271 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 ZNF592Q92610 1267 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 ARHGEF10LQ9HCE6 1279 aa4.68□□□□□ -1.66
FOXN3-207ENST00000555010 SPAG9O60271 1321 aaKnown RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 RNF17Q9BXT8 1623 aaKnown RBP4.68□□□□□ -1.66
FOXN3-207ENST00000555010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.67□□□□□ -1.66
FOXN3-207ENST00000555010 NPHP4O75161 1426 aaPredicted RBP4.67□□□□□ -1.66
FOXN3-207ENST00000555010 KIAA1107Q9UPP5 1409 aa4.67□□□□□ -1.66
FOXN3-207ENST00000555010 MYCP01106 439 aaPredicted RBP4.67□□□□□ -1.66
FOXN3-207ENST00000555010 RHOQP17081 205 aa4.67□□□□□ -1.66
FOXN3-207ENST00000555010 TBC1D9Q6ZT07 1266 aa4.67□□□□□ -1.66
FOXN3-207ENST00000555010 TNRQ92752 1358 aa4.66□□□□□ -1.66
FOXN3-207ENST00000555010 SYNMO15061 1565 aa4.66□□□□□ -1.66
FOXN3-207ENST00000555010 TERTO14746 1132 aaKnown RBP4.66□□□□□ -1.66
FOXN3-207ENST00000555010 TRAK2O60296 914 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms