RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
SIX1-203ENST00000554986 KCNQ2O43526 872 aa16.57■□□□□ 0.24
SIX1-203ENST00000554986 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
SIX1-203ENST00000554986 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
SIX1-203ENST00000554986 TRIM35Q9UPQ4 493 aa16.57■□□□□ 0.24
SIX1-203ENST00000554986 NHSQ6T4R5 1651 aa16.57■□□□□ 0.24
SIX1-203ENST00000554986 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
SIX1-203ENST00000554986 SNX21Q969T3 373 aa16.56■□□□□ 0.24
SIX1-203ENST00000554986 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
SIX1-203ENST00000554986 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
SIX1-203ENST00000554986 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
SIX1-203ENST00000554986 CEMIPQ8WUJ3 1361 aa16.55■□□□□ 0.24
SIX1-203ENST00000554986 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
SIX1-203ENST00000554986 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
SIX1-203ENST00000554986 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SIX1-203ENST00000554986 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
SIX1-203ENST00000554986 HSCBQ8IWL3 235 aa16.54■□□□□ 0.24
SIX1-203ENST00000554986 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
SIX1-203ENST00000554986 RTF1Q92541 710 aaKnown RBP16.54■□□□□ 0.24
SIX1-203ENST00000554986 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
SIX1-203ENST00000554986 MRC1P22897 1456 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
SIX1-203ENST00000554986 TRIM37O94972 964 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
SIX1-203ENST00000554986 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 ARXQ96QS3 562 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 MAP7D2Q96T17 732 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 BTAF1O14981 1849 aa16.53■□□□□ 0.24
SIX1-203ENST00000554986 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
SIX1-203ENST00000554986 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
SIX1-203ENST00000554986 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
SIX1-203ENST00000554986 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 OFD1O75665 1012 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 CABP4P57796 275 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 PIGBQ92521 554 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 SLC52A2Q9HAB3 445 aa16.51■□□□□ 0.23
SIX1-203ENST00000554986 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
SIX1-203ENST00000554986 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
SIX1-203ENST00000554986 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
SIX1-203ENST00000554986 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
SIX1-203ENST00000554986 ZSCAN30Q86W11 494 aa16.49■□□□□ 0.23
SIX1-203ENST00000554986 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
SIX1-203ENST00000554986 TEFQ10587 303 aa16.49■□□□□ 0.23
SIX1-203ENST00000554986 HS1BP3Q53T59 392 aa16.49■□□□□ 0.23
SIX1-203ENST00000554986 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.49■□□□□ 0.23
SIX1-203ENST00000554986 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
SIX1-203ENST00000554986 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
SIX1-203ENST00000554986 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
SIX1-203ENST00000554986 RLBP1P12271 317 aa16.47■□□□□ 0.23
SIX1-203ENST00000554986 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
SIX1-203ENST00000554986 CLEC17AQ6ZS10 378 aa16.47■□□□□ 0.23
SIX1-203ENST00000554986 GAS2L3Q86XJ1 694 aa16.47■□□□□ 0.23
SIX1-203ENST00000554986 TNPO1Q92973 898 aaKnown RBP16.47■□□□□ 0.23
SIX1-203ENST00000554986 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
SIX1-203ENST00000554986 ASAP1Q9ULH1 1129 aa16.47■□□□□ 0.23
SIX1-203ENST00000554986 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
SIX1-203ENST00000554986 SPRYD3Q8NCJ5 442 aa16.46■□□□□ 0.23
SIX1-203ENST00000554986 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.22
SIX1-203ENST00000554986 SLC39A6Q13433 755 aa16.46■□□□□ 0.22
SIX1-203ENST00000554986 KDM3BQ7LBC6 1761 aa16.45■□□□□ 0.22
SIX1-203ENST00000554986 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
SIX1-203ENST00000554986 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
SIX1-203ENST00000554986 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
SIX1-203ENST00000554986 KCNQ3O43525 872 aa16.44■□□□□ 0.22
SIX1-203ENST00000554986 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
SIX1-203ENST00000554986 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
SIX1-203ENST00000554986 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
SIX1-203ENST00000554986 APBA3O96018 575 aa16.44■□□□□ 0.22
SIX1-203ENST00000554986 LY75O60449 1722 aa16.43■□□□□ 0.22
SIX1-203ENST00000554986 ZNF853P0CG23 659 aa16.42■□□□□ 0.22
SIX1-203ENST00000554986 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
SIX1-203ENST00000554986 PRDM4Q9UKN5 801 aa16.42■□□□□ 0.22
SIX1-203ENST00000554986 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
SIX1-203ENST00000554986 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
SIX1-203ENST00000554986 CHL1O00533 1208 aa16.42■□□□□ 0.22
SIX1-203ENST00000554986 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
SIX1-203ENST00000554986 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
SIX1-203ENST00000554986 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
SIX1-203ENST00000554986 TSPYL4Q9UJ04 414 aa16.41■□□□□ 0.22
SIX1-203ENST00000554986 NASPP49321 788 aaPredicted RBP16.4■□□□□ 0.22
SIX1-203ENST00000554986 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
SIX1-203ENST00000554986 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
SIX1-203ENST00000554986 KLHL40Q2TBA0 621 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 RGPD3A6NKT7 1758 aaPredicted RBP16.4■□□□□ 0.22
SIX1-203ENST00000554986 RGPD4Q7Z3J3 1758 aa16.4■□□□□ 0.22
SIX1-203ENST00000554986 IL16Q14005 1332 aa16.39■□□□□ 0.21
SIX1-203ENST00000554986 PLSCR1O15162 318 aa16.39■□□□□ 0.21
SIX1-203ENST00000554986 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
SIX1-203ENST00000554986 KCNQ4P56696 695 aa16.39■□□□□ 0.21
SIX1-203ENST00000554986 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
SIX1-203ENST00000554986 SF3B2Q13435 895 aaKnown RBP16.39■□□□□ 0.21
SIX1-203ENST00000554986 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
SIX1-203ENST00000554986 CCDC125Q86Z20 511 aa16.39■□□□□ 0.21
SIX1-203ENST00000554986 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms