RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
TDP1-210ENST00000554976 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
TDP1-210ENST00000554976 MSH5O43196 834 aa11.21□□□□□ -0.61
TDP1-210ENST00000554976 RGS3P49796 1198 aa11.21□□□□□ -0.61
TDP1-210ENST00000554976 SLC39A6Q13433 755 aa11.21□□□□□ -0.61
TDP1-210ENST00000554976 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
TDP1-210ENST00000554976 ANO8Q9HCE9 1232 aaPredicted RBP11.21□□□□□ -0.61
TDP1-210ENST00000554976 DBF4Q9UBU7 674 aaPredicted RBP11.21□□□□□ -0.62
TDP1-210ENST00000554976 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
TDP1-210ENST00000554976 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
TDP1-210ENST00000554976 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
TDP1-210ENST00000554976 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
TDP1-210ENST00000554976 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
TDP1-210ENST00000554976 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
TDP1-210ENST00000554976 UTYO14607 1347 aa11.19□□□□□ -0.62
TDP1-210ENST00000554976 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
TDP1-210ENST00000554976 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
TDP1-210ENST00000554976 BCL9O00512 1426 aa11.19□□□□□ -0.62
TDP1-210ENST00000554976 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
TDP1-210ENST00000554976 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
TDP1-210ENST00000554976 ANXA1P04083 346 aa11.18□□□□□ -0.62
TDP1-210ENST00000554976 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
TDP1-210ENST00000554976 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 DNAAF4Q8WXU2 420 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 CABP4P57796 275 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 USP16Q9Y5T5 823 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 BCORQ6W2J9 1755 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 PI4KAP2A4QPH2 592 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
TDP1-210ENST00000554976 POLA2Q14181 598 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 PI4KAP1Q8N8J0 262 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 FMNL2Q96PY5 1086 aa11.17□□□□□ -0.62
TDP1-210ENST00000554976 NHSQ6T4R5 1651 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 TOM1O60784 492 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 SEC24BO95487 1268 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 EVA1CP58658 441 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 COL15A1P39059 1388 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 GNAI2P04899 355 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
TDP1-210ENST00000554976 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
TDP1-210ENST00000554976 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.62
TDP1-210ENST00000554976 GNAI3P08754 354 aa11.15□□□□□ -0.62
TDP1-210ENST00000554976 MTX1Q13505 466 aa11.15□□□□□ -0.62
TDP1-210ENST00000554976 MAP3K2Q9Y2U5 619 aa11.15□□□□□ -0.62
TDP1-210ENST00000554976 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 NBPF10Q6P3W6 841 aaKnown RBP11.14□□□□□ -0.63
TDP1-210ENST00000554976 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 SRCIN1Q9C0H9 1055 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 NUP98P52948 1817 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 AK9Q5TCS8 1911 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 NBPF7P0C2Y1 421 aaPredicted RBP11.14□□□□□ -0.63
TDP1-210ENST00000554976 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
TDP1-210ENST00000554976 LRRFIP2Q9Y608 721 aaKnown RBP11.14□□□□□ -0.63
TDP1-210ENST00000554976 JCADQ9P266 1359 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 LAMB2P55268 1798 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 BMP2KLQ5H9B9 411 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 KAZALD1Q96I82 304 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 LY75O60449 1722 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 TTC5Q8N0Z6 440 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 PIGBQ92521 554 aa11.13□□□□□ -0.63
TDP1-210ENST00000554976 GSPT1P15170 499 aaKnown RBP11.12□□□□□ -0.63
TDP1-210ENST00000554976 BTAF1O14981 1849 aa11.12□□□□□ -0.63
TDP1-210ENST00000554976 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
TDP1-210ENST00000554976 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 DDX54Q8TDD1 881 aaKnown RBP11.11□□□□□ -0.63
TDP1-210ENST00000554976 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
TDP1-210ENST00000554976 OSBPL3Q9H4L5 887 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 IPO9Q96P70 1041 aaKnown RBP11.11□□□□□ -0.63
TDP1-210ENST00000554976 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
TDP1-210ENST00000554976 TAF1LQ8IZX4 1826 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
TDP1-210ENST00000554976 MYH3P11055 1940 aa11.11□□□□□ -0.63
TDP1-210ENST00000554976 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
TDP1-210ENST00000554976 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
TDP1-210ENST00000554976 CASP7P55210 303 aa11.1□□□□□ -0.63
TDP1-210ENST00000554976 CWF19L2Q2TBE0 894 aaKnown RBP11.1□□□□□ -0.63
TDP1-210ENST00000554976 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
TDP1-210ENST00000554976 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
TDP1-210ENST00000554976 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
TDP1-210ENST00000554976 COPS6Q7L5N1 327 aa11.1□□□□□ -0.63
TDP1-210ENST00000554976 FNBP4Q8N3X1 1017 aaPredicted RBP11.1□□□□□ -0.63
TDP1-210ENST00000554976 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
TDP1-210ENST00000554976 DDX60Q8IY21 1712 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms