RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 SBF1O95248 1867 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 ZPR1O75312 459 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 TOMM70O94826 608 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 TM4SF1P30408 202 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 MTHFSDQ2M296 383 aaKnown RBP20.42■□□□□ 0.86
XRCC3-210ENST00000554974 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
XRCC3-210ENST00000554974 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
XRCC3-210ENST00000554974 COL3A1P02461 1466 aaPredicted RBP20.41■□□□□ 0.86
XRCC3-210ENST00000554974 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
XRCC3-210ENST00000554974 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
XRCC3-210ENST00000554974 TNRC6CQ9HCJ0 1690 aaKnown RBP20.39■□□□□ 0.86
XRCC3-210ENST00000554974 DIAPH1O60610 1272 aaKnown RBP20.39■□□□□ 0.85
XRCC3-210ENST00000554974 APLP1P51693 650 aa20.39■□□□□ 0.85
XRCC3-210ENST00000554974 NFIXQ14938 502 aa20.39■□□□□ 0.85
XRCC3-210ENST00000554974 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
XRCC3-210ENST00000554974 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
XRCC3-210ENST00000554974 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
XRCC3-210ENST00000554974 SIPA1L3O60292 1781 aaPredicted RBP20.38■□□□□ 0.85
XRCC3-210ENST00000554974 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
XRCC3-210ENST00000554974 BCL2L12Q9HB09 334 aa20.37■□□□□ 0.85
XRCC3-210ENST00000554974 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
XRCC3-210ENST00000554974 RASSF7Q02833 373 aa20.36■□□□□ 0.85
XRCC3-210ENST00000554974 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
XRCC3-210ENST00000554974 CANXP27824 592 aaKnown RBP20.35■□□□□ 0.85
XRCC3-210ENST00000554974 KDM2BQ8NHM5 1336 aa20.34■□□□□ 0.85
XRCC3-210ENST00000554974 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
XRCC3-210ENST00000554974 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
XRCC3-210ENST00000554974 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
XRCC3-210ENST00000554974 ANKRD31Q8N7Z5 1873 aa20.34■□□□□ 0.85
XRCC3-210ENST00000554974 U2SURPO15042 1029 aaKnown RBP20.33■□□□□ 0.85
XRCC3-210ENST00000554974 SERPINB2P05120 415 aa20.33■□□□□ 0.85
XRCC3-210ENST00000554974 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.84
XRCC3-210ENST00000554974 HTRA3P83110 453 aa20.32■□□□□ 0.84
XRCC3-210ENST00000554974 BICDL1Q6ZP65 573 aa20.32■□□□□ 0.84
XRCC3-210ENST00000554974 TTC5Q8N0Z6 440 aa20.32■□□□□ 0.84
XRCC3-210ENST00000554974 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
XRCC3-210ENST00000554974 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
XRCC3-210ENST00000554974 PRELPP51888 382 aa20.31■□□□□ 0.84
XRCC3-210ENST00000554974 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
XRCC3-210ENST00000554974 RRAGCQ9HB90 399 aa20.31■□□□□ 0.84
XRCC3-210ENST00000554974 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
XRCC3-210ENST00000554974 STARD3NLO95772 234 aa20.29■□□□□ 0.84
XRCC3-210ENST00000554974 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
XRCC3-210ENST00000554974 TEFQ10587 303 aa20.29■□□□□ 0.84
XRCC3-210ENST00000554974 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
XRCC3-210ENST00000554974 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-210ENST00000554974 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
XRCC3-210ENST00000554974 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
XRCC3-210ENST00000554974 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
XRCC3-210ENST00000554974 TTLL6Q8N841 843 aa20.28■□□□□ 0.84
XRCC3-210ENST00000554974 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
XRCC3-210ENST00000554974 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
XRCC3-210ENST00000554974 TBC1D9BQ66K14 1250 aa20.27■□□□□ 0.84
XRCC3-210ENST00000554974 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
XRCC3-210ENST00000554974 CACNA1SQ13698 1873 aa20.26■□□□□ 0.83
XRCC3-210ENST00000554974 LMNB1P20700 586 aa20.26■□□□□ 0.83
XRCC3-210ENST00000554974 FSTL1Q12841 308 aa20.26■□□□□ 0.83
XRCC3-210ENST00000554974 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
XRCC3-210ENST00000554974 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
XRCC3-210ENST00000554974 ZC3H4Q9UPT8 1303 aaKnown RBP20.26■□□□□ 0.83
XRCC3-210ENST00000554974 A0A087WZG4 1122 aa20.25■□□□□ 0.83
XRCC3-210ENST00000554974 H0YIN7 160 aa20.25■□□□□ 0.83
XRCC3-210ENST00000554974 NFKBIEO00221 500 aa20.25■□□□□ 0.83
XRCC3-210ENST00000554974 PCNTO95613 3336 aa20.24■□□□□ 0.83
XRCC3-210ENST00000554974 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
XRCC3-210ENST00000554974 KCNQ3O43525 872 aa20.23■□□□□ 0.83
XRCC3-210ENST00000554974 FER1L6Q2WGJ9 1857 aa20.23■□□□□ 0.83
XRCC3-210ENST00000554974 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
XRCC3-210ENST00000554974 A1BGP04217 495 aa20.22■□□□□ 0.83
XRCC3-210ENST00000554974 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
XRCC3-210ENST00000554974 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
XRCC3-210ENST00000554974 KLRG1Q96E93 195 aa20.22■□□□□ 0.83
XRCC3-210ENST00000554974 FMNL2Q96PY5 1086 aa20.22■□□□□ 0.83
XRCC3-210ENST00000554974 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
XRCC3-210ENST00000554974 GLTPD2A6NH11 291 aa20.21■□□□□ 0.83
XRCC3-210ENST00000554974 IL6STP40189 918 aaPredicted RBP20.21■□□□□ 0.83
XRCC3-210ENST00000554974 SMC1BQ8NDV3 1235 aa20.21■□□□□ 0.83
XRCC3-210ENST00000554974 ZNF622Q969S3 477 aaKnown RBP eCLIP20.21■□□□□ 0.83
XRCC3-210ENST00000554974 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
XRCC3-210ENST00000554974 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
XRCC3-210ENST00000554974 DICER1Q9UPY3 1922 aaKnown RBP20.2■□□□□ 0.82
XRCC3-210ENST00000554974 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
XRCC3-210ENST00000554974 BRIP1Q9BX63 1249 aa20.2■□□□□ 0.82
XRCC3-210ENST00000554974 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
XRCC3-210ENST00000554974 SLX4Q8IY92 1834 aa20.19■□□□□ 0.82
XRCC3-210ENST00000554974 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
XRCC3-210ENST00000554974 C21orf2O43822 256 aa20.19■□□□□ 0.82
XRCC3-210ENST00000554974 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
XRCC3-210ENST00000554974 VEGFAP15692 232 aaPredicted RBP20.18■□□□□ 0.82
XRCC3-210ENST00000554974 PDE6BP35913 854 aa20.18■□□□□ 0.82
XRCC3-210ENST00000554974 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
XRCC3-210ENST00000554974 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
XRCC3-210ENST00000554974 JMYQ8N9B5 988 aa20.17■□□□□ 0.82
XRCC3-210ENST00000554974 CFAP53Q96M91 514 aa20.17■□□□□ 0.82
XRCC3-210ENST00000554974 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
XRCC3-210ENST00000554974 NPHP1O15259 732 aa20.16■□□□□ 0.82
XRCC3-210ENST00000554974 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
XRCC3-210ENST00000554974 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
XRCC3-210ENST00000554974 DZIP3Q86Y13 1208 aaKnown RBP20.16■□□□□ 0.82
XRCC3-210ENST00000554974 MCM10Q7L590 875 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms