RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
XRCC3-207ENST00000554774 COL15A1P39059 1388 aa18.92■□□□□ 0.62
XRCC3-207ENST00000554774 U2SURPO15042 1029 aaKnown RBP18.91■□□□□ 0.62
XRCC3-207ENST00000554774 NARFQ9UHQ1 456 aa18.91■□□□□ 0.62
XRCC3-207ENST00000554774 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
XRCC3-207ENST00000554774 VSIG10Q8N0Z9 540 aa18.9■□□□□ 0.62
XRCC3-207ENST00000554774 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
XRCC3-207ENST00000554774 UBR2Q8IWV8 1755 aa18.89■□□□□ 0.61
XRCC3-207ENST00000554774 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
XRCC3-207ENST00000554774 NFIXQ14938 502 aa18.89■□□□□ 0.61
XRCC3-207ENST00000554774 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
XRCC3-207ENST00000554774 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
XRCC3-207ENST00000554774 TOMM70O94826 608 aa18.88■□□□□ 0.61
XRCC3-207ENST00000554774 TEFQ10587 303 aa18.87■□□□□ 0.61
XRCC3-207ENST00000554774 GAS2L2Q8NHY3 880 aa18.87■□□□□ 0.61
XRCC3-207ENST00000554774 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
XRCC3-207ENST00000554774 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
XRCC3-207ENST00000554774 GNAT3A8MTJ3 354 aa18.86■□□□□ 0.61
XRCC3-207ENST00000554774 STARD3NLO95772 234 aa18.86■□□□□ 0.61
XRCC3-207ENST00000554774 SERPINB2P05120 415 aa18.86■□□□□ 0.61
XRCC3-207ENST00000554774 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
XRCC3-207ENST00000554774 IL17REQ8NFR9 667 aa18.85■□□□□ 0.61
XRCC3-207ENST00000554774 NRXN2Q9P2S2 1712 aa18.85■□□□□ 0.61
XRCC3-207ENST00000554774 SBF1O95248 1867 aa18.84■□□□□ 0.61
XRCC3-207ENST00000554774 APLP1P51693 650 aa18.84■□□□□ 0.61
XRCC3-207ENST00000554774 BICDL1Q6ZP65 573 aa18.84■□□□□ 0.61
XRCC3-207ENST00000554774 C16orf71Q8IYS4 520 aaPredicted RBP18.84■□□□□ 0.61
XRCC3-207ENST00000554774 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
XRCC3-207ENST00000554774 A0A087WZG4 1122 aa18.83■□□□□ 0.6
XRCC3-207ENST00000554774 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
XRCC3-207ENST00000554774 ZNF790Q6PG37 636 aa18.83■□□□□ 0.6
XRCC3-207ENST00000554774 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-207ENST00000554774 SIPA1L3O60292 1781 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-207ENST00000554774 HEG1Q9ULI3 1381 aa18.82■□□□□ 0.6
XRCC3-207ENST00000554774 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
XRCC3-207ENST00000554774 RASSF7Q02833 373 aa18.82■□□□□ 0.6
XRCC3-207ENST00000554774 C2CD5Q86YS7 1000 aa18.82■□□□□ 0.6
XRCC3-207ENST00000554774 TEX13AQ9BXU3 409 aaPredicted RBP18.82■□□□□ 0.6
XRCC3-207ENST00000554774 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
XRCC3-207ENST00000554774 RBM46Q8TBY0 533 aaKnown RBP18.81■□□□□ 0.6
XRCC3-207ENST00000554774 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
XRCC3-207ENST00000554774 H0YIN7 160 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 IFFO2Q5TF58 517 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 FMNL2Q96PY5 1086 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 CARMIL3Q8ND23 1372 aa18.8■□□□□ 0.6
XRCC3-207ENST00000554774 PRKAR2BP31323 418 aa18.79■□□□□ 0.6
XRCC3-207ENST00000554774 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
XRCC3-207ENST00000554774 PHACTR3Q96KR7 559 aa18.79■□□□□ 0.6
XRCC3-207ENST00000554774 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
XRCC3-207ENST00000554774 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
XRCC3-207ENST00000554774 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
XRCC3-207ENST00000554774 SCN7AQ01118 1682 aa18.78■□□□□ 0.6
XRCC3-207ENST00000554774 TNRC6CQ9HCJ0 1690 aaKnown RBP18.78■□□□□ 0.6
XRCC3-207ENST00000554774 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
XRCC3-207ENST00000554774 KCNQ3O43525 872 aa18.77■□□□□ 0.6
XRCC3-207ENST00000554774 LMNB1P20700 586 aa18.77■□□□□ 0.6
XRCC3-207ENST00000554774 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
XRCC3-207ENST00000554774 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
XRCC3-207ENST00000554774 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
XRCC3-207ENST00000554774 A1BGP04217 495 aa18.76■□□□□ 0.59
XRCC3-207ENST00000554774 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
XRCC3-207ENST00000554774 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
XRCC3-207ENST00000554774 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
XRCC3-207ENST00000554774 WDR90Q96KV7 1748 aa18.75■□□□□ 0.59
XRCC3-207ENST00000554774 FSTL1Q12841 308 aa18.75■□□□□ 0.59
XRCC3-207ENST00000554774 DNAJC5GQ8N7S2 189 aa18.75■□□□□ 0.59
XRCC3-207ENST00000554774 ZNF622Q969S3 477 aaKnown RBP eCLIP18.75■□□□□ 0.59
XRCC3-207ENST00000554774 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
XRCC3-207ENST00000554774 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
XRCC3-207ENST00000554774 PDE6BP35913 854 aa18.74■□□□□ 0.59
XRCC3-207ENST00000554774 PRELPP51888 382 aa18.74■□□□□ 0.59
XRCC3-207ENST00000554774 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
XRCC3-207ENST00000554774 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
XRCC3-207ENST00000554774 BRIP1Q9BX63 1249 aa18.74■□□□□ 0.59
XRCC3-207ENST00000554774 NPHP1O15259 732 aa18.73■□□□□ 0.59
XRCC3-207ENST00000554774 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
XRCC3-207ENST00000554774 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
XRCC3-207ENST00000554774 SETDB2Q96T68 719 aa18.73■□□□□ 0.59
XRCC3-207ENST00000554774 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
XRCC3-207ENST00000554774 PDZRN3Q9UPQ7 1066 aa18.73■□□□□ 0.59
XRCC3-207ENST00000554774 TIAM2Q8IVF5 1701 aa18.72■□□□□ 0.59
XRCC3-207ENST00000554774 NFKBIEO00221 500 aa18.72■□□□□ 0.59
XRCC3-207ENST00000554774 CAMTA2O94983 1202 aa18.72■□□□□ 0.59
XRCC3-207ENST00000554774 HTRA3P83110 453 aa18.72■□□□□ 0.59
XRCC3-207ENST00000554774 MCM10Q7L590 875 aa18.72■□□□□ 0.59
XRCC3-207ENST00000554774 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
XRCC3-207ENST00000554774 COL11A2P13942 1736 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-207ENST00000554774 GLTPD2A6NH11 291 aa18.71■□□□□ 0.59
XRCC3-207ENST00000554774 PIP4K2AP48426 406 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-207ENST00000554774 CNBD1Q8NA66 436 aa18.71■□□□□ 0.59
XRCC3-207ENST00000554774 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
XRCC3-207ENST00000554774 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
XRCC3-207ENST00000554774 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
XRCC3-207ENST00000554774 C21orf2O43822 256 aa18.7■□□□□ 0.58
XRCC3-207ENST00000554774 ST5P78524 1137 aa18.7■□□□□ 0.58
XRCC3-207ENST00000554774 SMC1BQ8NDV3 1235 aa18.7■□□□□ 0.58
XRCC3-207ENST00000554774 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
XRCC3-207ENST00000554774 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms