RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
RDH11-207ENST00000554731 NARFQ9UHQ1 456 aa16.87■□□□□ 0.29
RDH11-207ENST00000554731 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
RDH11-207ENST00000554731 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
RDH11-207ENST00000554731 COL15A1P39059 1388 aa16.87■□□□□ 0.29
RDH11-207ENST00000554731 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
RDH11-207ENST00000554731 NFIXQ14938 502 aa16.86■□□□□ 0.29
RDH11-207ENST00000554731 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
RDH11-207ENST00000554731 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
RDH11-207ENST00000554731 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
RDH11-207ENST00000554731 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
RDH11-207ENST00000554731 KDM2BQ8NHM5 1336 aa16.84■□□□□ 0.29
RDH11-207ENST00000554731 STARD3NLO95772 234 aa16.83■□□□□ 0.28
RDH11-207ENST00000554731 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
RDH11-207ENST00000554731 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
RDH11-207ENST00000554731 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
RDH11-207ENST00000554731 SERPINB2P05120 415 aa16.82■□□□□ 0.28
RDH11-207ENST00000554731 BCL2L12Q9HB09 334 aa16.82■□□□□ 0.28
RDH11-207ENST00000554731 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
RDH11-207ENST00000554731 TEFQ10587 303 aa16.81■□□□□ 0.28
RDH11-207ENST00000554731 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
RDH11-207ENST00000554731 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
RDH11-207ENST00000554731 A0A087WZG4 1122 aa16.8■□□□□ 0.28
RDH11-207ENST00000554731 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
RDH11-207ENST00000554731 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
RDH11-207ENST00000554731 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
RDH11-207ENST00000554731 FSTL1Q12841 308 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
RDH11-207ENST00000554731 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
RDH11-207ENST00000554731 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
RDH11-207ENST00000554731 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
RDH11-207ENST00000554731 ZC3H4Q9UPT8 1303 aaKnown RBP16.78■□□□□ 0.28
RDH11-207ENST00000554731 H0YIN7 160 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 RASSF7Q02833 373 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 NRXN2Q9P2S2 1712 aa16.78■□□□□ 0.28
RDH11-207ENST00000554731 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.28
RDH11-207ENST00000554731 LMNB1P20700 586 aa16.77■□□□□ 0.28
RDH11-207ENST00000554731 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.28
RDH11-207ENST00000554731 SBF1O95248 1867 aa16.77■□□□□ 0.27
RDH11-207ENST00000554731 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
RDH11-207ENST00000554731 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
RDH11-207ENST00000554731 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
RDH11-207ENST00000554731 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
RDH11-207ENST00000554731 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
RDH11-207ENST00000554731 PDZRN3Q9UPQ7 1066 aa16.75■□□□□ 0.27
RDH11-207ENST00000554731 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
RDH11-207ENST00000554731 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
RDH11-207ENST00000554731 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
RDH11-207ENST00000554731 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
RDH11-207ENST00000554731 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 PDE6BP35913 854 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 SMC1BQ8NDV3 1235 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
RDH11-207ENST00000554731 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
RDH11-207ENST00000554731 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
RDH11-207ENST00000554731 NFKBIEO00221 500 aa16.72■□□□□ 0.27
RDH11-207ENST00000554731 A1BGP04217 495 aa16.72■□□□□ 0.27
RDH11-207ENST00000554731 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
RDH11-207ENST00000554731 PRELPP51888 382 aa16.72■□□□□ 0.27
RDH11-207ENST00000554731 PHACTR3Q96KR7 559 aa16.72■□□□□ 0.27
RDH11-207ENST00000554731 NPHP1O15259 732 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 HTRA3P83110 453 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
RDH11-207ENST00000554731 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
RDH11-207ENST00000554731 SCN7AQ01118 1682 aa16.7■□□□□ 0.26
RDH11-207ENST00000554731 KCNQ3O43525 872 aa16.7■□□□□ 0.26
RDH11-207ENST00000554731 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
RDH11-207ENST00000554731 CCDC24Q8N4L8 307 aa16.7■□□□□ 0.26
RDH11-207ENST00000554731 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
RDH11-207ENST00000554731 C21orf2O43822 256 aa16.69■□□□□ 0.26
RDH11-207ENST00000554731 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
RDH11-207ENST00000554731 ST5P78524 1137 aa16.68■□□□□ 0.26
RDH11-207ENST00000554731 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
RDH11-207ENST00000554731 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
RDH11-207ENST00000554731 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
RDH11-207ENST00000554731 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
RDH11-207ENST00000554731 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
RDH11-207ENST00000554731 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
RDH11-207ENST00000554731 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
RDH11-207ENST00000554731 CNKSR1Q969H4 720 aa16.67■□□□□ 0.26
RDH11-207ENST00000554731 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
RDH11-207ENST00000554731 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
RDH11-207ENST00000554731 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
RDH11-207ENST00000554731 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
RDH11-207ENST00000554731 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
RDH11-207ENST00000554731 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms