RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PTPRCP08575 1304 aa20.38■□□□□ 0.85
PPP4R3A-202ENST00000554390 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
PPP4R3A-202ENST00000554390 CUL4AQ13619 759 aa20.37■□□□□ 0.85
PPP4R3A-202ENST00000554390 IGSF3O75054 1194 aa20.36■□□□□ 0.85
PPP4R3A-202ENST00000554390 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
PPP4R3A-202ENST00000554390 U2AF2P26368 475 aaKnown RBP eCLIP20.36■□□□□ 0.852e-7■□□□□ 8.5
PPP4R3A-202ENST00000554390 CHMP3Q9Y3E7 222 aa20.36■□□□□ 0.85
PPP4R3A-202ENST00000554390 CEBPAP49715 358 aaPredicted RBP20.36■□□□□ 0.85
PPP4R3A-202ENST00000554390 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
PPP4R3A-202ENST00000554390 MCM2P49736 904 aa20.35■□□□□ 0.85
PPP4R3A-202ENST00000554390 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
PPP4R3A-202ENST00000554390 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
PPP4R3A-202ENST00000554390 CRB1P82279 1406 aa20.35■□□□□ 0.85
PPP4R3A-202ENST00000554390 RIOK3O14730 519 aaKnown RBP20.34■□□□□ 0.85
PPP4R3A-202ENST00000554390 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
PPP4R3A-202ENST00000554390 NGDNQ8NEJ9 315 aaKnown RBP20.34■□□□□ 0.85
PPP4R3A-202ENST00000554390 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
PPP4R3A-202ENST00000554390 FIBPO43427 364 aa20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 COL9A3Q14050 684 aaPredicted RBP20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 RASEFQ8IZ41 740 aa20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 INTS4Q96HW7 963 aaKnown RBP20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.84
PPP4R3A-202ENST00000554390 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 ANKRD7Q92527 254 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 TCHHQ07283 1943 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 KDM4AO75164 1064 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 KIAA1524Q8TCG1 905 aa20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 BBXQ8WY36 941 aaPredicted RBP20.32■□□□□ 0.84
PPP4R3A-202ENST00000554390 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 LTKP29376 864 aa20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 LARGE1O95461 756 aa20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 PYCARDQ9ULZ3 195 aa20.31■□□□□ 0.84
PPP4R3A-202ENST00000554390 NRXN3Q9Y4C0 1643 aa20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 NLRP6P59044 892 aa20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 IL17REQ8NFR9 667 aa20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 UBTFL1P0CB47 393 aaPredicted RBP20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 MCCP23508 829 aa20.3■□□□□ 0.84
PPP4R3A-202ENST00000554390 KCNQ3O43525 872 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 OSBPL3Q9H4L5 887 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 KIAA0232Q92628 1395 aa20.29■□□□□ 0.84
PPP4R3A-202ENST00000554390 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
PPP4R3A-202ENST00000554390 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
PPP4R3A-202ENST00000554390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.28■□□□□ 0.84
PPP4R3A-202ENST00000554390 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
PPP4R3A-202ENST00000554390 FAM173BQ6P4H8 233 aa20.28■□□□□ 0.84
PPP4R3A-202ENST00000554390 C3P01024 1663 aa20.27■□□□□ 0.84
PPP4R3A-202ENST00000554390 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
PPP4R3A-202ENST00000554390 CTIFO43310 598 aaKnown RBP20.27■□□□□ 0.84
PPP4R3A-202ENST00000554390 ITSN1Q15811 1721 aa20.27■□□□□ 0.84
PPP4R3A-202ENST00000554390 SETD1BQ9UPS6 1966 aaKnown RBP20.27■□□□□ 0.84
PPP4R3A-202ENST00000554390 AP5Z1O43299 807 aa20.27■□□□□ 0.83
PPP4R3A-202ENST00000554390 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.83
PPP4R3A-202ENST00000554390 AK2P54819 239 aa20.26■□□□□ 0.83
PPP4R3A-202ENST00000554390 GIMAP6Q6P9H5 292 aa20.26■□□□□ 0.83
PPP4R3A-202ENST00000554390 CCDC30Q5VVM6 783 aa20.26■□□□□ 0.83
PPP4R3A-202ENST00000554390 SPC24Q8NBT2 197 aa20.26■□□□□ 0.83
PPP4R3A-202ENST00000554390 GNAI3P08754 354 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 ZNF771Q7L3S4 317 aaPredicted RBP20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 TMEM87AQ8NBN3 555 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 FEZ1Q99689 392 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 PEAK1Q9H792 1746 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 CEP170BQ9Y4F5 1589 aaPredicted RBP20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 CCDC83Q8IWF9 413 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 NECAB1Q8N987 351 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 FERMT3Q86UX7 667 aa20.25■□□□□ 0.83
PPP4R3A-202ENST00000554390 LGR6Q9HBX8 967 aa20.24■□□□□ 0.83
PPP4R3A-202ENST00000554390 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
PPP4R3A-202ENST00000554390 SNX14Q9Y5W7 946 aa20.24■□□□□ 0.83
PPP4R3A-202ENST00000554390 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 OGFRQ9NZT2 677 aa20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 ANAPC15P60006 121 aa20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 RHPN1Q8TCX5 695 aa20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
PPP4R3A-202ENST00000554390 PI4KAP2A4QPH2 592 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 PI4KAP1Q8N8J0 262 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 NRKQ7Z2Y5 1582 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 VPS37CA5D8V6 355 aaPredicted RBP20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 UBE2HP62256 183 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 PTH1RQ03431 593 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 FUCA2Q9BTY2 467 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms