RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PLXNC1O60486 1568 aa9.37□□□□□ -0.91
ATXN3-226ENST00000554350 KDM5DQ9BY66 1539 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 ZC3H4Q9UPT8 1303 aaKnown RBP9.36□□□□□ -0.91
ATXN3-226ENST00000554350 PZPP20742 1482 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 MAN1A2O60476 641 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-226ENST00000554350 RGS12O14924 1447 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
ATXN3-226ENST00000554350 AFF2P51816 1311 aa9.35□□□□□ -0.91
ATXN3-226ENST00000554350 AP1G2O75843 785 aa9.35□□□□□ -0.91
ATXN3-226ENST00000554350 CBLBQ13191 982 aa9.35□□□□□ -0.91
ATXN3-226ENST00000554350 Q6ZVU0 165 aa9.35□□□□□ -0.91
ATXN3-226ENST00000554350 BCANQ96GW7 911 aa9.35□□□□□ -0.91
ATXN3-226ENST00000554350 WASHC2CQ9Y4E1 1318 aa9.34□□□□□ -0.91
ATXN3-226ENST00000554350 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-226ENST00000554350 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
ATXN3-226ENST00000554350 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
ATXN3-226ENST00000554350 ZC3H13Q5T200 1668 aaKnown RBP9.34□□□□□ -0.91
ATXN3-226ENST00000554350 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 UPP2O95045 317 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 USP17L8P0C7I0 530 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 RBM6P78332 1123 aaKnown RBP9.33□□□□□ -0.92
ATXN3-226ENST00000554350 TXNDC2Q86VQ3 553 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 ZSCAN1Q8NBB4 408 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
ATXN3-226ENST00000554350 MSH6P52701 1360 aa9.33□□□□□ -0.92
ATXN3-226ENST00000554350 SCAF11Q99590 1463 aaKnown RBP9.33□□□□□ -0.92
ATXN3-226ENST00000554350 KIF3BO15066 747 aa9.32□□□□□ -0.92
ATXN3-226ENST00000554350 INTS6LQ5JSJ4 861 aaKnown RBP9.32□□□□□ -0.92
ATXN3-226ENST00000554350 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
ATXN3-226ENST00000554350 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
ATXN3-226ENST00000554350 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
ATXN3-226ENST00000554350 COL16A1Q07092 1604 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-226ENST00000554350 YY1P25490 414 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 RFC5P40937 340 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 ZBTB33Q86T24 672 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 C8orf37Q96NL8 207 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 INO80Q9ULG1 1556 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-226ENST00000554350 ADGBQ8N7X0 1667 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 FMN1Q68DA7 1419 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 FGD6Q6ZV73 1430 aa9.31□□□□□ -0.92
ATXN3-226ENST00000554350 SPINT1O43278 529 aa9.3□□□□□ -0.92
ATXN3-226ENST00000554350 PTK2Q05397 1052 aa9.3□□□□□ -0.92
ATXN3-226ENST00000554350 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
ATXN3-226ENST00000554350 CDV3Q9UKY7 258 aaKnown RBP9.3□□□□□ -0.92
ATXN3-226ENST00000554350 CDC42BPAQ5VT25 1732 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 TTLL8A6PVC2 850 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 LTKP29376 864 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 NGLY1Q96IV0 654 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
ATXN3-226ENST00000554350 KCNA6P17658 529 aa9.28□□□□□ -0.92
ATXN3-226ENST00000554350 SHPRHQ149N8 1683 aa9.27□□□□□ -0.93
ATXN3-226ENST00000554350 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
ATXN3-226ENST00000554350 AGBL1Q96MI9 1066 aa9.27□□□□□ -0.93
ATXN3-226ENST00000554350 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
ATXN3-226ENST00000554350 PTSQ03393 145 aa9.26□□□□□ -0.93
ATXN3-226ENST00000554350 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
ATXN3-226ENST00000554350 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.93
ATXN3-226ENST00000554350 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
ATXN3-226ENST00000554350 SLC26A8Q96RN1 970 aa9.26□□□□□ -0.93
ATXN3-226ENST00000554350 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
ATXN3-226ENST00000554350 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-226ENST00000554350 LRP5O75197 1615 aa9.26□□□□□ -0.93
ATXN3-226ENST00000554350 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
ATXN3-226ENST00000554350 TIAM1Q13009 1591 aa9.25□□□□□ -0.93
ATXN3-226ENST00000554350 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
ATXN3-226ENST00000554350 KRT76Q01546 638 aa9.25□□□□□ -0.93
ATXN3-226ENST00000554350 CCDC125Q86Z20 511 aa9.25□□□□□ -0.93
ATXN3-226ENST00000554350 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-226ENST00000554350 PLEKHH2Q8IVE3 1493 aa9.25□□□□□ -0.93
ATXN3-226ENST00000554350 PRDM15P57071 1507 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-226ENST00000554350 ESPNB1AK53 854 aa9.24□□□□□ -0.93
ATXN3-226ENST00000554350 LILRA1O75019 489 aa9.24□□□□□ -0.93
ATXN3-226ENST00000554350 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-226ENST00000554350 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-226ENST00000554350 UBR1Q8IWV7 1749 aa9.24□□□□□ -0.93
ATXN3-226ENST00000554350 NCOA2Q15596 1464 aa9.23□□□□□ -0.93
ATXN3-226ENST00000554350 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
ATXN3-226ENST00000554350 ADD1P35611 737 aaKnown RBP9.23□□□□□ -0.93
ATXN3-226ENST00000554350 GJD4Q96KN9 370 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-226ENST00000554350 KIAA1107Q9UPP5 1409 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 LRRIQ1Q96JM4 1722 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 FAM181BA6NEQ2 426 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 RELBQ01201 579 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
ATXN3-226ENST00000554350 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-226ENST00000554350 ERVK-7P63135 1459 aa9.21□□□□□ -0.93
ATXN3-226ENST00000554350 CFAP65Q6ZU64 1925 aaKnown RBP9.21□□□□□ -0.93
ATXN3-226ENST00000554350 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
ATXN3-226ENST00000554350 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
ATXN3-226ENST00000554350 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.94
ATXN3-226ENST00000554350 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
ATXN3-226ENST00000554350 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.94
ATXN3-226ENST00000554350 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
ATXN3-226ENST00000554350 ABCC3O15438 1527 aa9.21□□□□□ -0.94
ATXN3-226ENST00000554350 SLIT1O75093 1534 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms