RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
RIPK3-202ENST00000554338 ZPR1O75312 459 aa18.41■□□□□ 0.54
RIPK3-202ENST00000554338 TM4SF1P30408 202 aa18.41■□□□□ 0.54
RIPK3-202ENST00000554338 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
RIPK3-202ENST00000554338 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
RIPK3-202ENST00000554338 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
RIPK3-202ENST00000554338 GPBP1L1Q9HC44 474 aaPredicted RBP18.41■□□□□ 0.54
RIPK3-202ENST00000554338 FCHSD2O94868 740 aa18.4■□□□□ 0.54
RIPK3-202ENST00000554338 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
RIPK3-202ENST00000554338 TEFQ10587 303 aa18.4■□□□□ 0.54
RIPK3-202ENST00000554338 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
RIPK3-202ENST00000554338 ZNF496Q96IT1 587 aaPredicted RBP18.4■□□□□ 0.54
RIPK3-202ENST00000554338 NARFQ9UHQ1 456 aa18.4■□□□□ 0.54
RIPK3-202ENST00000554338 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
RIPK3-202ENST00000554338 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
RIPK3-202ENST00000554338 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.53
RIPK3-202ENST00000554338 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
RIPK3-202ENST00000554338 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
RIPK3-202ENST00000554338 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
RIPK3-202ENST00000554338 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
RIPK3-202ENST00000554338 NFIXQ14938 502 aa18.38■□□□□ 0.53
RIPK3-202ENST00000554338 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
RIPK3-202ENST00000554338 CHRNA5P30532 468 aa18.37■□□□□ 0.53
RIPK3-202ENST00000554338 STARD3NLO95772 234 aa18.36■□□□□ 0.53
RIPK3-202ENST00000554338 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
RIPK3-202ENST00000554338 ARHGAP27Q6ZUM4 889 aa18.36■□□□□ 0.53
RIPK3-202ENST00000554338 KCNQ3O43525 872 aa18.35■□□□□ 0.53
RIPK3-202ENST00000554338 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
RIPK3-202ENST00000554338 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
RIPK3-202ENST00000554338 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
RIPK3-202ENST00000554338 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
RIPK3-202ENST00000554338 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
RIPK3-202ENST00000554338 DALRD3Q5D0E6 543 aaKnown RBP18.34■□□□□ 0.53
RIPK3-202ENST00000554338 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
RIPK3-202ENST00000554338 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
RIPK3-202ENST00000554338 KIF3CO14782 793 aa18.32■□□□□ 0.52
RIPK3-202ENST00000554338 SERPINB2P05120 415 aa18.32■□□□□ 0.52
RIPK3-202ENST00000554338 DLEC1Q9Y238 1755 aa18.32■□□□□ 0.52
RIPK3-202ENST00000554338 MCM10Q7L590 875 aa18.31■□□□□ 0.52
RIPK3-202ENST00000554338 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
RIPK3-202ENST00000554338 ZNF330Q9Y3S2 320 aaPredicted RBP18.31■□□□□ 0.52
RIPK3-202ENST00000554338 A0A087WZG4 1122 aa18.3■□□□□ 0.52
RIPK3-202ENST00000554338 A1BGP04217 495 aa18.3■□□□□ 0.52
RIPK3-202ENST00000554338 IL6STP40189 918 aaPredicted RBP18.3■□□□□ 0.52
RIPK3-202ENST00000554338 C9orf131Q5VYM1 1079 aa18.3■□□□□ 0.52
RIPK3-202ENST00000554338 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
RIPK3-202ENST00000554338 PRAMEF22A3QJZ6 481 aa18.29■□□□□ 0.52
RIPK3-202ENST00000554338 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
RIPK3-202ENST00000554338 TBC1D9BQ66K14 1250 aa18.29■□□□□ 0.52
RIPK3-202ENST00000554338 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
RIPK3-202ENST00000554338 BCORQ6W2J9 1755 aa18.29■□□□□ 0.52
RIPK3-202ENST00000554338 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
RIPK3-202ENST00000554338 ANKRD31Q8N7Z5 1873 aa18.28■□□□□ 0.52
RIPK3-202ENST00000554338 COL11A2P13942 1736 aaPredicted RBP18.27■□□□□ 0.52
RIPK3-202ENST00000554338 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
RIPK3-202ENST00000554338 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
RIPK3-202ENST00000554338 RASSF7Q02833 373 aa18.26■□□□□ 0.51
RIPK3-202ENST00000554338 C2CD5Q86YS7 1000 aa18.26■□□□□ 0.51
RIPK3-202ENST00000554338 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
RIPK3-202ENST00000554338 RNF181Q9P0P0 153 aa18.26■□□□□ 0.51
RIPK3-202ENST00000554338 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
RIPK3-202ENST00000554338 HSPA6P17066 643 aa18.25■□□□□ 0.51
RIPK3-202ENST00000554338 SBF1O95248 1867 aa18.24■□□□□ 0.51
RIPK3-202ENST00000554338 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
RIPK3-202ENST00000554338 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
RIPK3-202ENST00000554338 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
RIPK3-202ENST00000554338 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
RIPK3-202ENST00000554338 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
RIPK3-202ENST00000554338 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
RIPK3-202ENST00000554338 TTLL6Q8N841 843 aa18.23■□□□□ 0.51
RIPK3-202ENST00000554338 PRELPP51888 382 aa18.22■□□□□ 0.51
RIPK3-202ENST00000554338 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
RIPK3-202ENST00000554338 KDM3BQ7LBC6 1761 aa18.22■□□□□ 0.51
RIPK3-202ENST00000554338 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
RIPK3-202ENST00000554338 H0YIN7 160 aa18.21■□□□□ 0.51
RIPK3-202ENST00000554338 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
RIPK3-202ENST00000554338 NPM2Q86SE8 214 aaKnown RBP18.21■□□□□ 0.51
RIPK3-202ENST00000554338 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
RIPK3-202ENST00000554338 PLEKHF1Q96S99 279 aa18.21■□□□□ 0.51
RIPK3-202ENST00000554338 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
RIPK3-202ENST00000554338 TAF7Q15545 349 aaPredicted RBP18.2■□□□□ 0.5
RIPK3-202ENST00000554338 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
RIPK3-202ENST00000554338 SETDB2Q96T68 719 aa18.2■□□□□ 0.5
RIPK3-202ENST00000554338 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
RIPK3-202ENST00000554338 NFKBIEO00221 500 aa18.19■□□□□ 0.5
RIPK3-202ENST00000554338 TOMM70O94826 608 aa18.19■□□□□ 0.5
RIPK3-202ENST00000554338 TIAM2Q8IVF5 1701 aa18.19■□□□□ 0.5
RIPK3-202ENST00000554338 TNRC6CQ9HCJ0 1690 aaKnown RBP18.18■□□□□ 0.5
RIPK3-202ENST00000554338 PDE6BP35913 854 aa18.18■□□□□ 0.5
RIPK3-202ENST00000554338 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
RIPK3-202ENST00000554338 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.5
RIPK3-202ENST00000554338 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
RIPK3-202ENST00000554338 NEFMP07197 916 aa18.17■□□□□ 0.5
RIPK3-202ENST00000554338 LMNB1P20700 586 aa18.17■□□□□ 0.5
RIPK3-202ENST00000554338 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
RIPK3-202ENST00000554338 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
RIPK3-202ENST00000554338 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
RIPK3-202ENST00000554338 ST5P78524 1137 aa18.16■□□□□ 0.5
RIPK3-202ENST00000554338 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
RIPK3-202ENST00000554338 NPHP1O15259 732 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms