RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 C5P01031 1676 aa9.74□□□□□ -0.85
TDP1-209ENST00000554180 PXDNLA1KZ92 1463 aa9.73□□□□□ -0.85
TDP1-209ENST00000554180 TCERG1O14776 1098 aaKnown RBP9.73□□□□□ -0.85
TDP1-209ENST00000554180 PTCD1O75127 700 aaKnown RBP9.73□□□□□ -0.85
TDP1-209ENST00000554180 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
TDP1-209ENST00000554180 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
TDP1-209ENST00000554180 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
TDP1-209ENST00000554180 RGS17Q9UGC6 210 aaPredicted RBP9.73□□□□□ -0.85
TDP1-209ENST00000554180 ZNF831Q5JPB2 1677 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 PRAMEF22A3QJZ6 481 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 STARD3NLO95772 234 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 RLBP1P12271 317 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 PDIA6Q15084 440 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 CRBNQ96SW2 442 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
TDP1-209ENST00000554180 PPP4R2Q9NY27 417 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
TDP1-209ENST00000554180 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 KCNQ2O43526 872 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 DDX58O95786 925 aaKnown RBP9.71□□□□□ -0.86
TDP1-209ENST00000554180 SIK1P57059 783 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 FKBP5Q13451 457 aaPredicted RBP9.71□□□□□ -0.86
TDP1-209ENST00000554180 INTS3Q68E01 1043 aaKnown RBP9.71□□□□□ -0.86
TDP1-209ENST00000554180 G2E3Q7L622 706 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
TDP1-209ENST00000554180 RBM42Q9BTD8 480 aaKnown RBP9.71□□□□□ -0.86
TDP1-209ENST00000554180 BCL11BQ9C0K0 894 aaPredicted RBP9.71□□□□□ -0.86
TDP1-209ENST00000554180 CCT4P50991 539 aaKnown RBP9.7□□□□□ -0.86
TDP1-209ENST00000554180 PROSER3Q2NL68 480 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 TMEM57Q8N5G2 664 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 SLC4A9Q96Q91 983 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 TNNQ9UQP3 1299 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 IBTKQ9P2D0 1353 aaPredicted RBP9.7□□□□□ -0.86
TDP1-209ENST00000554180 ATP10DQ9P241 1426 aa9.7□□□□□ -0.86
TDP1-209ENST00000554180 CYP19A1P11511 503 aaPredicted RBP9.69□□□□□ -0.86
TDP1-209ENST00000554180 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
TDP1-209ENST00000554180 POTEAQ6S8J7 498 aa9.69□□□□□ -0.86
TDP1-209ENST00000554180 DNAJC10Q8IXB1 793 aa9.69□□□□□ -0.86
TDP1-209ENST00000554180 KAT6BQ8WYB5 2073 aa9.69□□□□□ -0.86
TDP1-209ENST00000554180 PHAXQ9H814 394 aaKnown RBP9.69□□□□□ -0.86
TDP1-209ENST00000554180 BTAF1O14981 1849 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 TJP1Q07157 1748 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 ADCY9O60503 1353 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 ANXA1P04083 346 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 FAM182BQ5T319 152 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
TDP1-209ENST00000554180 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 DNAAF4Q8WXU2 420 aa9.68□□□□□ -0.86
TDP1-209ENST00000554180 PI4KAP2A4QPH2 592 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 F6X3S4 739 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 MYL6BP14649 208 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 IL6STP40189 918 aaPredicted RBP9.67□□□□□ -0.86
TDP1-209ENST00000554180 PI4KAP1Q8N8J0 262 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 N4BP2Q86UW6 1770 aaPredicted RBP9.67□□□□□ -0.86
TDP1-209ENST00000554180 RREB1Q92766 1687 aa9.67□□□□□ -0.86
TDP1-209ENST00000554180 CNTNAP4Q9C0A0 1308 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
TDP1-209ENST00000554180 A1BGP04217 495 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 COPS6Q7L5N1 327 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 PTF1AQ7RTS3 328 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 PLBD2Q8NHP8 589 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 CCDC136Q96JN2 1154 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 ZBTB40Q9NUA8 1239 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 CCDC87Q9NVE4 849 aa9.66□□□□□ -0.86
TDP1-209ENST00000554180 LY75O60449 1722 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 ALDH1L1O75891 902 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 CRKLP46109 303 aaKnown RBP9.65□□□□□ -0.86
TDP1-209ENST00000554180 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 ITPK1Q13572 414 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 SLC27A3Q5K4L6 730 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 BEND3Q5T5X7 828 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 RC3H1Q5TC82 1133 aaKnown RBP9.65□□□□□ -0.86
TDP1-209ENST00000554180 SLC4A10Q6U841 1118 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 LINS1Q8NG48 757 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 CCNL1Q9UK58 526 aaPredicted RBP9.65□□□□□ -0.86
TDP1-209ENST00000554180 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 MAP3K2Q9Y2U5 619 aa9.65□□□□□ -0.86
TDP1-209ENST00000554180 EP400Q96L91 3159 aa9.65□□□□□ -0.87
TDP1-209ENST00000554180 COL5A3P25940 1745 aaPredicted RBP9.65□□□□□ -0.87
TDP1-209ENST00000554180 RGL2O15211 777 aa9.64□□□□□ -0.87
TDP1-209ENST00000554180 TRIM37O94972 964 aa9.64□□□□□ -0.87
TDP1-209ENST00000554180 GNAI3P08754 354 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms