RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 OVOS2A0A0J9YW53 1432 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CRB1P82279 1406 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 OVOS2Q6IE36 1432 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 KIAA0100Q14667 2235 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DPEP1P16444 411 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ITPK1Q13572 414 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 AMOTQ4VCS5 1084 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 HDGFL1Q5TGJ6 251 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DPY19L2Q6NUT2 758 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 OLFM4Q6UX06 510 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 BARGINQ6ZT62 677 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 NLGN1Q8N2Q7 840 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CNBD1Q8NA66 436 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 GAS2L2Q8NHY3 880 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 JDP2Q8WYK2 163 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 TSR2Q969E8 191 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 DCAF5Q96JK2 942 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 STK31Q9BXU1 1019 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 BMP2KQ9NSY1 1161 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ANKIB1Q9P2G1 1089 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ABT1Q9ULW3 272 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FLT4P35916 1363 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 MROH1Q8NDA8 1641 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 KIF1BO60333 1816 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 TMEM131LA2VDJ0 1609 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FKBP5Q13451 457 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 WASHC2AQ641Q2 1341 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 IGSF1Q8N6C5 1336 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 CHMP4CQ96CF2 233 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 FMNL2Q96PY5 1086 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 ATG3Q9NT62 314 aa3.23□□□□□ -1.89
PRPF39-205ENST00000554081 MKRN1Q9UHC7 482 aaKnown RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 IQSEC3Q9UPP2 1182 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-205ENST00000554081 SETD1AO15047 1707 aaKnown RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 SERPINB2P05120 415 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RASSF7Q02833 373 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 DALRD3Q5D0E6 543 aaKnown RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 C9orf131Q5VYM1 1079 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 LARGE2Q8N3Y3 721 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF784Q8NCA9 323 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 LINC00116Q8NCU8 138 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 BEGAINQ9BUH8 593 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RRAGCQ9HB90 399 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 NMRK2Q9NPI5 230 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 CACNA1GO43497 2377 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 REREQ9P2R6 1566 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 NEXMIFQ5QGS0 1516 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PTCH1Q13635 1447 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 CCDC7Q96M83 1385 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 RAD21O60216 631 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PPP2R1AP30153 589 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ST5P78524 1137 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 OS9Q13438 667 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 VPS37DQ86XT2 251 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF277Q9NRM2 450 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PIM2Q9P1W9 311 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 TSKSQ9UJT2 592 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 ADAMTS8Q9UP79 889 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 DIP2AQ14689 1571 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 AATKQ6ZMQ8 1374 aa3.22□□□□□ -1.89
PRPF39-205ENST00000554081 PLSCR1O15162 318 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 RNMTO43148 476 aaKnown RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 GRIN3BO60391 1043 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 RAD17O75943 681 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 SEC24BO95487 1268 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 DIEXFQ68CQ4 756 aaKnown RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 ZNF790Q6PG37 636 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 TPTE2Q6XPS3 522 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 COPS6Q7L5N1 327 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 HELBQ8NG08 1087 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 FAM89AQ96GI7 184 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 GPR101Q96P66 508 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-205ENST00000554081 CROCC2H7BZ55 1655 aa3.21□□□□□ -1.89
PRPF39-205ENST00000554081 POLR3AO14802 1390 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 PDIA4P13667 645 aaKnown RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 AMIGO3Q86WK7 504 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 HS3ST6Q96QI5 342 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 C9orf78Q9NZ63 289 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 COLQQ9Y215 455 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 ZNF652Q9Y2D9 606 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 DCCP43146 1447 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 ANKRD36BQ8N2N9 1353 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 SLC4A3P48751 1232 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 NEXNQ0ZGT2 675 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 CHAF1AQ13111 956 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 TAF7Q15545 349 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 DOK7Q18PE1 504 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 AKAP4Q5JQC9 854 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 TTLL7Q6ZT98 887 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 SYNE4Q8N205 404 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 FLAD1Q8NFF5 587 aa3.21□□□□□ -1.9
PRPF39-205ENST00000554081 PNNQ9H307 717 aaKnown RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 POLR1AO95602 1720 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-205ENST00000554081 NCOA3Q9Y6Q9 1424 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SBNO2Q9Y2G9 1366 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 STRCP1A6NGW2 1772 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 LMTK2Q8IWU2 1503 aa3.2□□□□□ -1.9
PRPF39-205ENST00000554081 SPHKAPQ2M3C7 1700 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms