RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
TMEM55B-205ENST00000554028 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.28
TMEM55B-205ENST00000554028 SHANK3Q9BYB0 1731 aa13.33□□□□□ -0.28
TMEM55B-205ENST00000554028 STARD3NLO95772 234 aa13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 PTPRCP08575 1304 aa13.32□□□□□ -0.28
TMEM55B-205ENST00000554028 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 KCNQ2O43526 872 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 CHPF2Q9P2E5 772 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 RGS17Q9UGC6 210 aaPredicted RBP13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
TMEM55B-205ENST00000554028 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 POTEAQ6S8J7 498 aa13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 CLUAP1Q96AJ1 413 aa13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
TMEM55B-205ENST00000554028 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
TMEM55B-205ENST00000554028 TRIM27P14373 513 aa13.28□□□□□ -0.28
TMEM55B-205ENST00000554028 FLIIQ13045 1269 aa13.28□□□□□ -0.28
TMEM55B-205ENST00000554028 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 ATP6V1AP38606 617 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 SIK1P57059 783 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 AAMPQ13685 434 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
TMEM55B-205ENST00000554028 MYL6BP14649 208 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 C20orf194Q5TEA3 1177 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 COG6Q9Y2V7 657 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 TOGARAM1Q9Y4F4 1720 aa13.26□□□□□ -0.29
TMEM55B-205ENST00000554028 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 KCPQ6ZWJ8 1503 aa13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 G2E3Q7L622 706 aa13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
TMEM55B-205ENST00000554028 TRIM37O94972 964 aa13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 A1BGP04217 495 aa13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
TMEM55B-205ENST00000554028 ANXA1P04083 346 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 PDIA6Q15084 440 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 RIC3Q7Z5B4 369 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 PAPPAQ13219 1627 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 ITGB4P16144 1822 aa13.23□□□□□ -0.29
TMEM55B-205ENST00000554028 RGS12O14924 1447 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 ABCC4O15439 1325 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 RLBP1P12271 317 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 NEXNQ0ZGT2 675 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 PROSER3Q2NL68 480 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
TMEM55B-205ENST00000554028 KAT6BQ8WYB5 2073 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 PI4KAP2A4QPH2 592 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 PI4KAP1Q8N8J0 262 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 ARXQ96QS3 562 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
TMEM55B-205ENST00000554028 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 F6X3S4 739 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 APBA3O96018 575 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 NBPF10Q6P3W6 841 aaKnown RBP13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 NBPF15Q8N660 670 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
TMEM55B-205ENST00000554028 NHSQ6T4R5 1651 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms