RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 MYL6BP14649 208 aa15.95■□□□□ 0.14
VIPAS39-206ENST00000553888 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
VIPAS39-206ENST00000553888 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 ADAMTS2O95450 1211 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 PDIA6Q15084 440 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 USP16Q9Y5T5 823 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 PNMA6EA0A0J9YXQ4 647 aa15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
VIPAS39-206ENST00000553888 GNAI2P04899 355 aa15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 OTUD7AQ8TE49 926 aaPredicted RBP15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
VIPAS39-206ENST00000553888 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 PXDNLA1KZ92 1463 aa15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 GLI3P10071 1580 aa15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 BEND3Q5T5X7 828 aa15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 SRCIN1Q9C0H9 1055 aa15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-206ENST00000553888 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 CWF19L2Q2TBE0 894 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-206ENST00000553888 GNAI3P08754 354 aa15.9■□□□□ 0.14
VIPAS39-206ENST00000553888 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
VIPAS39-206ENST00000553888 DDX21Q9NR30 783 aaKnown RBP eCLIP15.9■□□□□ 0.14
VIPAS39-206ENST00000553888 SLC4A3P48751 1232 aa15.89■□□□□ 0.13
VIPAS39-206ENST00000553888 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
VIPAS39-206ENST00000553888 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
VIPAS39-206ENST00000553888 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
VIPAS39-206ENST00000553888 FMNL2Q96PY5 1086 aa15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 XAGE3Q8WTP9 111 aa15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 HYPKQ9NX55 129 aa15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 PLEKHM2Q8IWE5 1019 aa15.88■□□□□ 0.13
VIPAS39-206ENST00000553888 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
VIPAS39-206ENST00000553888 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
VIPAS39-206ENST00000553888 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
VIPAS39-206ENST00000553888 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
VIPAS39-206ENST00000553888 PDE4CQ08493 712 aa15.87■□□□□ 0.13
VIPAS39-206ENST00000553888 ITGB4P16144 1822 aa15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 HMMRO75330 724 aa15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 GSPT1P15170 499 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 MFAP1P55081 439 aaKnown RBP15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 LAMB4A4D0S4 1761 aa15.86■□□□□ 0.13
VIPAS39-206ENST00000553888 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 TSHZ3Q63HK5 1081 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 PAPPAQ13219 1627 aa15.85■□□□□ 0.13
VIPAS39-206ENST00000553888 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
VIPAS39-206ENST00000553888 JARID2Q92833 1246 aaPredicted RBP15.84■□□□□ 0.13
VIPAS39-206ENST00000553888 DISP2A7MBM2 1401 aa15.84■□□□□ 0.13
VIPAS39-206ENST00000553888 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
VIPAS39-206ENST00000553888 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 A1BGP04217 495 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 IGKV5-2P06315 115 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 BMP2KLQ5H9B9 411 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 AFDNP55196 1824 aaKnown RBP15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 NRAPQ86VF7 1730 aa15.83■□□□□ 0.12
VIPAS39-206ENST00000553888 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 TOM1O60784 492 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 MYD88Q99836 296 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 HOMEZQ8IX15 550 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 PIGBQ92521 554 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
VIPAS39-206ENST00000553888 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-206ENST00000553888 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
VIPAS39-206ENST00000553888 SSH3Q8TE77 659 aa15.81■□□□□ 0.12
VIPAS39-206ENST00000553888 ATP5J2-PTCD1G3V325 749 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 LINS1Q8NG48 757 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 IBTKQ9P2D0 1353 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 TBC1D32Q96NH3 1257 aa15.8■□□□□ 0.12
VIPAS39-206ENST00000553888 SURF6O75683 361 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-206ENST00000553888 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms