RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 CASZ1Q86V15 1759 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 KCNQ4P56696 695 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 PLEKHO1Q53GL0 409 aaPredicted RBP11.04□□□□□ -0.64
RDH11-205ENST00000553816 MPRIPQ6WCQ1 1025 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 LRRC4BQ9NT99 713 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 C5P01031 1676 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
RDH11-205ENST00000553816 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
RDH11-205ENST00000553816 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
RDH11-205ENST00000553816 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
RDH11-205ENST00000553816 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
RDH11-205ENST00000553816 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
RDH11-205ENST00000553816 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
RDH11-205ENST00000553816 PIGBQ92521 554 aa11.02□□□□□ -0.65
RDH11-205ENST00000553816 CFAP53Q96M91 514 aa11.02□□□□□ -0.65
RDH11-205ENST00000553816 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
RDH11-205ENST00000553816 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
RDH11-205ENST00000553816 PDGFDQ9GZP0 370 aaPredicted RBP11.01□□□□□ -0.65
RDH11-205ENST00000553816 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
RDH11-205ENST00000553816 RALBP1Q15311 655 aa11□□□□□ -0.65
RDH11-205ENST00000553816 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
RDH11-205ENST00000553816 PHACTR3Q96KR7 559 aa11□□□□□ -0.65
RDH11-205ENST00000553816 LGR6Q9HBX8 967 aa11□□□□□ -0.65
RDH11-205ENST00000553816 G3V3G9 751 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
RDH11-205ENST00000553816 PRKAR2BP31323 418 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
RDH11-205ENST00000553816 ZNF827Q17R98 1081 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 NBPF14Q5TI25 921 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 DCAF5Q96JK2 942 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
RDH11-205ENST00000553816 ASAP1Q9ULH1 1129 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
RDH11-205ENST00000553816 LRP5O75197 1615 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
RDH11-205ENST00000553816 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 HSP90AB1P08238 724 aaKnown RBP10.98□□□□□ -0.65
RDH11-205ENST00000553816 SLC15A2Q16348 729 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 ATG3Q9NT62 314 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
RDH11-205ENST00000553816 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 TJP1Q07157 1748 aa10.98□□□□□ -0.65
RDH11-205ENST00000553816 ERVV-2B6SEH9 535 aa10.97□□□□□ -0.65
RDH11-205ENST00000553816 RNMTO43148 476 aaKnown RBP10.97□□□□□ -0.65
RDH11-205ENST00000553816 NFATC2IPQ8NCF5 419 aa10.97□□□□□ -0.65
RDH11-205ENST00000553816 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
RDH11-205ENST00000553816 MRC1P22897 1456 aa10.97□□□□□ -0.65
RDH11-205ENST00000553816 ZNF831Q5JPB2 1677 aa10.97□□□□□ -0.65
RDH11-205ENST00000553816 UBR2Q8IWV8 1755 aa10.96□□□□□ -0.65
RDH11-205ENST00000553816 CABP4P57796 275 aa10.96□□□□□ -0.65
RDH11-205ENST00000553816 SLC27A3Q5K4L6 730 aa10.96□□□□□ -0.65
RDH11-205ENST00000553816 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
RDH11-205ENST00000553816 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
RDH11-205ENST00000553816 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.66
RDH11-205ENST00000553816 FCHSD2O94868 740 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 ITPK1Q13572 414 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 DOK7Q18PE1 504 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
RDH11-205ENST00000553816 IL17REQ8NFR9 667 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 STK32BQ9NY57 414 aa10.95□□□□□ -0.66
RDH11-205ENST00000553816 MAP3K5Q99683 1374 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 SIK1P57059 783 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 CCDC184Q52MB2 194 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 SMIM5Q71RC9 77 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
RDH11-205ENST00000553816 SLC52A2Q9HAB3 445 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
RDH11-205ENST00000553816 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
RDH11-205ENST00000553816 CICQ96RK0 1608 aaPredicted RBP10.94□□□□□ -0.66
RDH11-205ENST00000553816 GNAT3A8MTJ3 354 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 AMIGO3Q86WK7 504 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 GAS2L2Q8NHY3 880 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
RDH11-205ENST00000553816 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
RDH11-205ENST00000553816 ZBTB7AO95365 584 aa10.92□□□□□ -0.66
RDH11-205ENST00000553816 ATP6V1AP38606 617 aa10.92□□□□□ -0.66
RDH11-205ENST00000553816 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
RDH11-205ENST00000553816 TMEM92Q6UXU6 159 aa10.92□□□□□ -0.66
RDH11-205ENST00000553816 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
RDH11-205ENST00000553816 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
RDH11-205ENST00000553816 C4AP0C0L4 1744 aa10.91□□□□□ -0.66
RDH11-205ENST00000553816 KDM3BQ7LBC6 1761 aa10.9□□□□□ -0.66
RDH11-205ENST00000553816 MCM10Q7L590 875 aa10.9□□□□□ -0.66
RDH11-205ENST00000553816 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
RDH11-205ENST00000553816 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
RDH11-205ENST00000553816 CCDC146Q8IYE0 955 aa10.9□□□□□ -0.66
RDH11-205ENST00000553816 TFCP2L1Q9NZI6 479 aa10.9□□□□□ -0.66
RDH11-205ENST00000553816 KCNQ3O43525 872 aa10.89□□□□□ -0.67
RDH11-205ENST00000553816 PTGER2P43116 358 aa10.89□□□□□ -0.67
RDH11-205ENST00000553816 EFCAB3Q8N7B9 438 aa10.89□□□□□ -0.67
RDH11-205ENST00000553816 ADAMTS8Q9UP79 889 aa10.89□□□□□ -0.67
RDH11-205ENST00000553816 TEFQ10587 303 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms