RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 AFDNP55196 1824 aaKnown RBP21.28■■□□□ 1
ACTN1-209ENST00000553659 POLRMTO00411 1230 aaKnown RBP21.28■■□□□ 1
ACTN1-209ENST00000553659 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
ACTN1-209ENST00000553659 SLC39A6Q13433 755 aa21.28■■□□□ 1
ACTN1-209ENST00000553659 IFFO2Q5TF58 517 aa21.28■■□□□ 1
ACTN1-209ENST00000553659 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
ACTN1-209ENST00000553659 SOS1Q07889 1333 aaPredicted RBP21.28■■□□□ 1
ACTN1-209ENST00000553659 PER1O15534 1290 aaPredicted RBP21.27■■□□□ 1
ACTN1-209ENST00000553659 C9orf131Q5VYM1 1079 aa21.27■■□□□ 1
ACTN1-209ENST00000553659 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
ACTN1-209ENST00000553659 MRS2Q9HD23 443 aa21.27■■□□□ 1
ACTN1-209ENST00000553659 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
ACTN1-209ENST00000553659 MTHFSDQ2M296 383 aaKnown RBP21.26■□□□□ 0.99
ACTN1-209ENST00000553659 NMRK2Q9NPI5 230 aa21.26■□□□□ 0.99
ACTN1-209ENST00000553659 KCPQ6ZWJ8 1503 aa21.25■□□□□ 0.99
ACTN1-209ENST00000553659 CHRNA5P30532 468 aa21.25■□□□□ 0.99
ACTN1-209ENST00000553659 APLP1P51693 650 aa21.25■□□□□ 0.99
ACTN1-209ENST00000553659 NARFQ9UHQ1 456 aa21.25■□□□□ 0.99
ACTN1-209ENST00000553659 UBR2Q8IWV8 1755 aa21.24■□□□□ 0.99
ACTN1-209ENST00000553659 VSIG10Q8N0Z9 540 aa21.24■□□□□ 0.99
ACTN1-209ENST00000553659 NRXN2Q9P2S2 1712 aa21.23■□□□□ 0.99
ACTN1-209ENST00000553659 MYBBP1AQ9BQG0 1328 aaKnown RBP21.23■□□□□ 0.99
ACTN1-209ENST00000553659 NFIXQ14938 502 aa21.22■□□□□ 0.99
ACTN1-209ENST00000553659 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
ACTN1-209ENST00000553659 ZBTB1Q9Y2K1 713 aa21.22■□□□□ 0.99
ACTN1-209ENST00000553659 COL15A1P39059 1388 aa21.22■□□□□ 0.99
ACTN1-209ENST00000553659 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
ACTN1-209ENST00000553659 RNF181Q9P0P0 153 aa21.2■□□□□ 0.98
ACTN1-209ENST00000553659 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.98
ACTN1-209ENST00000553659 BCL2L12Q9HB09 334 aa21.19■□□□□ 0.98
ACTN1-209ENST00000553659 KDM2BQ8NHM5 1336 aa21.19■□□□□ 0.98
ACTN1-209ENST00000553659 CCDC88AQ3V6T2 1871 aa21.19■□□□□ 0.98
ACTN1-209ENST00000553659 SERPINB2P05120 415 aa21.18■□□□□ 0.98
ACTN1-209ENST00000553659 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
ACTN1-209ENST00000553659 STARD3NLO95772 234 aa21.17■□□□□ 0.98
ACTN1-209ENST00000553659 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
ACTN1-209ENST00000553659 TTC5Q8N0Z6 440 aa21.17■□□□□ 0.98
ACTN1-209ENST00000553659 DNAJC5GQ8N7S2 189 aa21.17■□□□□ 0.98
ACTN1-209ENST00000553659 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
ACTN1-209ENST00000553659 TNRC6CQ9HCJ0 1690 aaKnown RBP21.16■□□□□ 0.98
ACTN1-209ENST00000553659 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
ACTN1-209ENST00000553659 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
ACTN1-209ENST00000553659 COL3A1P02461 1466 aaPredicted RBP21.15■□□□□ 0.98
ACTN1-209ENST00000553659 EIF5P55010 431 aaKnown RBP21.15■□□□□ 0.98
ACTN1-209ENST00000553659 IL17REQ8NFR9 667 aa21.15■□□□□ 0.98
ACTN1-209ENST00000553659 A0A087WZG4 1122 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
ACTN1-209ENST00000553659 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.973e-7■■□□□ 13
ACTN1-209ENST00000553659 FSTL1Q12841 308 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 TTLL6Q8N841 843 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 GAS2L2Q8NHY3 880 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 TEX13AQ9BXU3 409 aaPredicted RBP21.14■□□□□ 0.97
ACTN1-209ENST00000553659 RRAGCQ9HB90 399 aa21.14■□□□□ 0.97
ACTN1-209ENST00000553659 TEFQ10587 303 aa21.13■□□□□ 0.97
ACTN1-209ENST00000553659 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
ACTN1-209ENST00000553659 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
ACTN1-209ENST00000553659 ZC3H4Q9UPT8 1303 aaKnown RBP21.12■□□□□ 0.97
ACTN1-209ENST00000553659 C2CD5Q86YS7 1000 aa21.12■□□□□ 0.97
ACTN1-209ENST00000553659 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 H0YIN7 160 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 LMNB1P20700 586 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 RASSF7Q02833 373 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 BICDL1Q6ZP65 573 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
ACTN1-209ENST00000553659 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
ACTN1-209ENST00000553659 CCDC184Q52MB2 194 aa21.1■□□□□ 0.97
ACTN1-209ENST00000553659 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
ACTN1-209ENST00000553659 TBC1D9BQ66K14 1250 aa21.09■□□□□ 0.97
ACTN1-209ENST00000553659 FAM9BQ8IZU0 186 aa21.09■□□□□ 0.97
ACTN1-209ENST00000553659 CARMIL3Q8ND23 1372 aa21.09■□□□□ 0.97
ACTN1-209ENST00000553659 SCN7AQ01118 1682 aa21.09■□□□□ 0.97
ACTN1-209ENST00000553659 IL6STP40189 918 aaPredicted RBP21.08■□□□□ 0.97
ACTN1-209ENST00000553659 PRELPP51888 382 aa21.08■□□□□ 0.97
ACTN1-209ENST00000553659 FMNL2Q96PY5 1086 aa21.08■□□□□ 0.97
ACTN1-209ENST00000553659 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
ACTN1-209ENST00000553659 TBC1D2BQ9UPU7 963 aa21.08■□□□□ 0.97
ACTN1-209ENST00000553659 GLTPD2A6NH11 291 aa21.07■□□□□ 0.96
ACTN1-209ENST00000553659 BRIP1Q9BX63 1249 aa21.07■□□□□ 0.96
ACTN1-209ENST00000553659 DICER1Q9UPY3 1922 aaKnown RBP21.07■□□□□ 0.96
ACTN1-209ENST00000553659 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
ACTN1-209ENST00000553659 TIAM2Q8IVF5 1701 aa21.07■□□□□ 0.96
ACTN1-209ENST00000553659 SMC1BQ8NDV3 1235 aa21.06■□□□□ 0.96
ACTN1-209ENST00000553659 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
ACTN1-209ENST00000553659 FER1L6Q2WGJ9 1857 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 A1BGP04217 495 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 VEGFAP15692 232 aaPredicted RBP21.05■□□□□ 0.96
ACTN1-209ENST00000553659 PDE6BP35913 854 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 HTRA3P83110 453 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 PNISRQ8TF01 805 aaKnown RBP21.05■□□□□ 0.96
ACTN1-209ENST00000553659 KLRG1Q96E93 195 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
ACTN1-209ENST00000553659 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
ACTN1-209ENST00000553659 NFKBIEO00221 500 aa21.04■□□□□ 0.96
ACTN1-209ENST00000553659 PRKAR2BP31323 418 aa21.04■□□□□ 0.96
ACTN1-209ENST00000553659 PRR5LQ6MZQ0 368 aa21.04■□□□□ 0.96
ACTN1-209ENST00000553659 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
ACTN1-209ENST00000553659 ZNF622Q969S3 477 aaKnown RBP eCLIP21.04■□□□□ 0.96
ACTN1-209ENST00000553659 CFAP53Q96M91 514 aa21.04■□□□□ 0.96
ACTN1-209ENST00000553659 KCNQ3O43525 872 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms