RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ANXA1P04083 346 aa12.49□□□□□ -0.41
CHD8-204ENST00000553622 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
CHD8-204ENST00000553622 MYL6BP14649 208 aa12.49□□□□□ -0.41
CHD8-204ENST00000553622 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
CHD8-204ENST00000553622 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 CCNL1Q9UK58 526 aaPredicted RBP12.49□□□□□ -0.41
CHD8-204ENST00000553622 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
CHD8-204ENST00000553622 KIF16BQ96L93 1317 aa12.48□□□□□ -0.41
CHD8-204ENST00000553622 NEFLP07196 543 aa12.48□□□□□ -0.41
CHD8-204ENST00000553622 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
CHD8-204ENST00000553622 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
CHD8-204ENST00000553622 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
CHD8-204ENST00000553622 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
CHD8-204ENST00000553622 A1BGP04217 495 aa12.47□□□□□ -0.41
CHD8-204ENST00000553622 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
CHD8-204ENST00000553622 ITPK1Q13572 414 aa12.47□□□□□ -0.41
CHD8-204ENST00000553622 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
CHD8-204ENST00000553622 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
CHD8-204ENST00000553622 EP400Q96L91 3159 aa12.46□□□□□ -0.41
CHD8-204ENST00000553622 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
CHD8-204ENST00000553622 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.41
CHD8-204ENST00000553622 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.41
CHD8-204ENST00000553622 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
CHD8-204ENST00000553622 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
CHD8-204ENST00000553622 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
CHD8-204ENST00000553622 G2E3Q7L622 706 aa12.46□□□□□ -0.41
CHD8-204ENST00000553622 ARXQ96QS3 562 aa12.46□□□□□ -0.41
CHD8-204ENST00000553622 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.42
CHD8-204ENST00000553622 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
CHD8-204ENST00000553622 CYP19A1P11511 503 aaPredicted RBP12.45□□□□□ -0.42
CHD8-204ENST00000553622 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
CHD8-204ENST00000553622 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
CHD8-204ENST00000553622 FTSJ3Q8IY81 847 aaKnown RBP12.45□□□□□ -0.42
CHD8-204ENST00000553622 LINC00116Q8NCU8 138 aa12.45□□□□□ -0.42
CHD8-204ENST00000553622 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
CHD8-204ENST00000553622 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
CHD8-204ENST00000553622 DDX21Q9NR30 783 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHD8-204ENST00000553622 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
CHD8-204ENST00000553622 RREB1Q92766 1687 aa12.45□□□□□ -0.42
CHD8-204ENST00000553622 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
CHD8-204ENST00000553622 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
CHD8-204ENST00000553622 FLIIQ13045 1269 aa12.44□□□□□ -0.42
CHD8-204ENST00000553622 CCDC87Q9NVE4 849 aa12.44□□□□□ -0.42
CHD8-204ENST00000553622 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
CHD8-204ENST00000553622 NUP98P52948 1817 aa12.44□□□□□ -0.42
CHD8-204ENST00000553622 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
CHD8-204ENST00000553622 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 NBPF14Q5TI25 921 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
CHD8-204ENST00000553622 ATF7IPQ6VMQ6 1270 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
CHD8-204ENST00000553622 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
CHD8-204ENST00000553622 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 PTPRCP08575 1304 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 TUBGCP6Q96RT7 1819 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 TRIM27P14373 513 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
CHD8-204ENST00000553622 PDIA6Q15084 440 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 SLC4A10Q6U841 1118 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
CHD8-204ENST00000553622 F6X3S4 739 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 PLSCR1O15162 318 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 GNPATO15228 680 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
CHD8-204ENST00000553622 MS4A1P11836 297 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 BAG6P46379 1132 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
CHD8-204ENST00000553622 INTS5Q6P9B9 1019 aaKnown RBP12.41□□□□□ -0.42
CHD8-204ENST00000553622 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
CHD8-204ENST00000553622 AK7Q96M32 723 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 LRRC4BQ9NT99 713 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 ANKRD36CQ5JPF3 1778 aa12.41□□□□□ -0.42
CHD8-204ENST00000553622 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 C4AP0C0L4 1744 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 FKBP8Q14318 412 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 RIC3Q7Z5B4 369 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
CHD8-204ENST00000553622 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 PI4KAP2A4QPH2 592 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 PHF14O94880 888 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 RLBP1P12271 317 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 EZH2Q15910 746 aaKnown RBP12.39□□□□□ -0.43
CHD8-204ENST00000553622 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 PI4KAP1Q8N8J0 262 aa12.39□□□□□ -0.43
CHD8-204ENST00000553622 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms