RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
LINC02407-202ENST00000553247 BTG4Q9NY30 223 aa11.45□□□□□ -0.58
LINC02407-202ENST00000553247 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.45□□□□□ -0.58
LINC02407-202ENST00000553247 QRICH2Q9H0J4 1663 aa11.45□□□□□ -0.58
LINC02407-202ENST00000553247 ATAD2Q6PL18 1390 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 USP19O94966 1318 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 GCP02774 474 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 BLOC1S3Q6QNY0 202 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 TESK2Q96S53 571 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 PRDM11Q9NQV5 511 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
LINC02407-202ENST00000553247 USP6P35125 1406 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 CPDO75976 1380 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 EP400Q96L91 3159 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 NUTM2GQ5VZR2 741 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
LINC02407-202ENST00000553247 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
LINC02407-202ENST00000553247 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
LINC02407-202ENST00000553247 ST20-MTHFSA0A0A6YYL1 179 aa11.42□□□□□ -0.58
LINC02407-202ENST00000553247 PRSS12P56730 875 aa11.42□□□□□ -0.58
LINC02407-202ENST00000553247 ZC3H6P61129 1189 aaKnown RBP11.42□□□□□ -0.58
LINC02407-202ENST00000553247 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
LINC02407-202ENST00000553247 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
LINC02407-202ENST00000553247 KIAA0232Q92628 1395 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 SPATA31A5Q5VU36 1347 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 TTC21BQ7Z4L5 1316 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 SPATA31A7Q8IWB4 1347 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 CRYBG1Q9Y4K1 1723 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
LINC02407-202ENST00000553247 RASSF7Q02833 373 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
LINC02407-202ENST00000553247 GLI3P10071 1580 aa11.41□□□□□ -0.58
LINC02407-202ENST00000553247 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
LINC02407-202ENST00000553247 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
LINC02407-202ENST00000553247 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
LINC02407-202ENST00000553247 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
LINC02407-202ENST00000553247 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
LINC02407-202ENST00000553247 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
LINC02407-202ENST00000553247 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
LINC02407-202ENST00000553247 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
LINC02407-202ENST00000553247 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
LINC02407-202ENST00000553247 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
LINC02407-202ENST00000553247 EVA1CP58658 441 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 KRT27Q7Z3Y8 459 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 TERF2IPQ9NYB0 399 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 AATKQ6ZMQ8 1374 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 CD163L1Q9NR16 1453 aa11.37□□□□□ -0.59
LINC02407-202ENST00000553247 NRAPQ86VF7 1730 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
LINC02407-202ENST00000553247 RGL2O15211 777 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
LINC02407-202ENST00000553247 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
LINC02407-202ENST00000553247 SLIT3O75094 1523 aa11.35□□□□□ -0.59
LINC02407-202ENST00000553247 PHRF1Q9P1Y6 1649 aaKnown RBP11.35□□□□□ -0.59
LINC02407-202ENST00000553247 MAP3K7O43318 606 aa11.35□□□□□ -0.59
LINC02407-202ENST00000553247 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
LINC02407-202ENST00000553247 THRAP3Q9Y2W1 955 aaKnown RBP11.35□□□□□ -0.59
LINC02407-202ENST00000553247 TMF1P82094 1093 aa11.34□□□□□ -0.59
LINC02407-202ENST00000553247 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
LINC02407-202ENST00000553247 LARP1Q6PKG0 1096 aaKnown RBP11.34□□□□□ -0.59
LINC02407-202ENST00000553247 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
LINC02407-202ENST00000553247 STRN4Q9NRL3 753 aa11.34□□□□□ -0.59
LINC02407-202ENST00000553247 ERBB4Q15303 1308 aa11.34□□□□□ -0.59
LINC02407-202ENST00000553247 AKAP12Q02952 1782 aa11.33□□□□□ -0.59
LINC02407-202ENST00000553247 NRKQ7Z2Y5 1582 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 USP47Q96K76 1375 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 H3BM21 787 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
LINC02407-202ENST00000553247 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
LINC02407-202ENST00000553247 RPIAP49247 311 aa11.32□□□□□ -0.6
LINC02407-202ENST00000553247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC02407-202ENST00000553247 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
LINC02407-202ENST00000553247 LMO7Q8WWI1 1683 aa11.32□□□□□ -0.6
LINC02407-202ENST00000553247 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
LINC02407-202ENST00000553247 EDC4Q6P2E9 1401 aaKnown RBP11.32□□□□□ -0.6
LINC02407-202ENST00000553247 BRWD3Q6RI45 1802 aa11.32□□□□□ -0.6
LINC02407-202ENST00000553247 A0A1W2PP64 1363 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 ADH1BP00325 375 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 IGHA1P01876 353 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 VEGFBP49765 207 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 NME9Q86XW9 330 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
LINC02407-202ENST00000553247 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
LINC02407-202ENST00000553247 CD2BP2O95400 341 aaKnown RBP11.3□□□□□ -0.6
LINC02407-202ENST00000553247 DDX12PQ92771 950 aa11.3□□□□□ -0.6
LINC02407-202ENST00000553247 COL18A1P39060 1754 aa11.3□□□□□ -0.6
LINC02407-202ENST00000553247 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
LINC02407-202ENST00000553247 CRB1P82279 1406 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms